Basic Information
Locus ID:
gene-QOZ80_4BG0334190
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 3294205 | 3296625 | - | gene-QOZ80_4BG0334190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 63,595.33 Da | 36.22 | 89.69 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 29 | 158 | 3.2618E-16 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 438 | 514 | 5.6E-11 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 191 | 302 | 6.6E-23 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 171 | 302 | 4.32E-30 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 166 | 2.94E-21 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 438 | 513 | 7.07E-13 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 422 | 538 | 1.2E-21 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 165 | 334 | 3.5E-46 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 25 | 164 | 2.2E-18 | IPR008974 |
| SMART | SM00225 | BTB_4 | 196 | 304 | 9.2E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 406 | 515 | 6.1E-4 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 27 | 160 | 17.552727 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 196 | 264 | 17.375925 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039818772.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QCP1 | BTB/POZ and MATH domain-containing protein 2-like OS=Panicum miliaceum OX=4540 GN=C2845_PM15G22660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303290, gene-QOZ80_4BG0334190 |