Basic Information
Locus ID:
gene-QOZ80_4BG0334180
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 3281177 | 3282400 | - | gene-QOZ80_4BG0334180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 44,822.46 Da | 34.35 | 77.42 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 31 | 159 | 8.51156E-25 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 220 | 339 | 3.9E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 219 | 339 | 2.75E-28 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 26 | 163 | 7.36E-31 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 340 | 407 | 1.4E-16 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 215 | 337 | 2.1E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 28 | 162 | 9.5E-28 | IPR008974 |
| SMART | SM00061 | math_3 | 34 | 140 | 2.8E-8 | IPR002083 |
| SMART | SM00225 | BTB_4 | 230 | 340 | 2.1E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 230 | 301 | 19.175259 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 29 | 158 | 22.359793 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039852193.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TXT1 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39764 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene-QOZ80_4BG0334180.