Basic Information
Locus ID:
gene-QOZ80_4BG0334170
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 3274344 | 3279090 | - | gene-QOZ80_4BG0334170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.04 | 68,493.54 Da | 42.67 | 96.31 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 271 | 382 | 1.14938E-47 | - |
| CDD | cd00121 | MATH | 129 | 246 | 9.6011E-23 | IPR002083 |
| Pfam | PF00917 | MATH domain | 135 | 245 | 3.3E-7 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 440 | 547 | 5.0E-25 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 275 | 384 | 4.4E-27 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 126 | 257 | 6.7E-26 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 264 | 383 | 9.81E-33 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 429 | 548 | 1.71E-30 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 550 | 617 | 6.7E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 125 | 253 | 1.3E-26 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 256 | 415 | 1.4E-52 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 424 | 545 | 9.2E-34 | IPR011333 |
| SMART | SM00061 | math_3 | 131 | 231 | 1.0E-11 | IPR002083 |
| SMART | SM00225 | BTB_4 | 283 | 385 | 3.4E-23 | IPR000210 |
| SMART | SM00225 | BTB_4 | 448 | 550 | 1.8E-21 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 126 | 248 | 21.694986 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 283 | 346 | 17.231152 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 448 | 515 | 16.69342 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_017628568.1 | PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Gossypium arboreum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TYF5 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303280, gene-QOZ80_4BG0334170 |