Basic Information
Locus ID:
gene-QOZ80_4BG0334120
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 3239571 | 3240761 | - | gene-QOZ80_4BG0334120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.94 | 43,396.01 Da | 43.28 | 78.79 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 209 | 319 | 8.04308E-46 | - |
| CDD | cd00121 | MATH | 60 | 180 | 2.46693E-20 | IPR002083 |
| Pfam | PF00917 | MATH domain | 76 | 178 | 2.8E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 210 | 320 | 4.7E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 200 | 320 | 4.4E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 56 | 192 | 4.58E-31 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 321 | 395 | 7.1E-20 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 57 | 187 | 3.9E-26 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 195 | 317 | 1.9E-37 | IPR011333 |
| SMART | SM00061 | math_3 | 62 | 167 | 2.0E-4 | IPR002083 |
| SMART | SM00225 | BTB_4 | 220 | 322 | 4.6E-23 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 57 | 182 | 20.032969 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 220 | 283 | 17.127741 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025824177.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7D079 | BTB domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G291000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology