HalophFGD

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Basic Information
Locus ID: gene-QOZ80_4AG0325200
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: RING-like zinc finger
Maps and Mapping Data
Chromosome Start End Strand ID
chr4A 33818820 33819392 - gene-QOZ80_4AG0325200
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.68 20,358.23 Da 64.33 85.89 -0.01
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034584762.1 E3 ubiquitin-protein ligase EL5-like [Setaria viridis] 0
TrEMBL A0A5J9U5P2 RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_35092 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 4 gene-LOC103707311, gene-LOC103711453, gene-LOC103711455 ...
gene-LOC120107430
Hydrocharitaceae Thalassia testudinum 1 gene.Thate01g30800
Poaceae Echinochloa crus-galli 17 AH01.3706, AH01.3707, AH01.3708, AH05.2793, AH05.2795 ...
AH05.2796, BH01.4056, BH01.4058, BH02.1525, BH05.2945, BH05.2946, CH01.4321, CH02.1664, CH02.175, CH05.2894, CH05.2898, CH08.136
Poaceae Eleusine coracana subsp. coracana 11 gene-QOZ80_1AG0014470, gene-QOZ80_1BG0063370 ...
gene-QOZ80_3AG0247610, gene-QOZ80_3AG0247620, gene-QOZ80_3BG0280600, gene-QOZ80_3BG0280610, gene-QOZ80_4AG0325200, gene-QOZ80_5AG0376410, gene-QOZ80_5AG0376420, gene-QOZ80_5BG0423590, gene-QOZ80_5BG0423600
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.1HG0061070.1.CDS1 ...
HORVU.MOREX.r3.4HG0378170.1.CDS1
Poaceae Lolium multiflorum 6 gene-QYE76_013796, gene-QYE76_013798, gene-QYE76_013799 ...
gene-QYE76_068015, gene-QYE76_068026, gene-QYE76_068045
Poaceae Oryza coarctata 6 Oco02G009290, Oco06G013320, Oco09G007480, Oco09G007490 ...
Oco10G007730, Oco10G007740
Poaceae Oryza sativa 6 LOC_Os01g20930.1, LOC_Os03g22080.1, LOC_Os03g22110.1 ...
LOC_Os05g29150.1, LOC_Os05g29676.1, LOC_Os05g29710.1
Poaceae Paspalum vaginatum 4 gene-BS78_01G360300, gene-BS78_09G114100 ...
gene-BS78_09G114200, gene-BS78_09G114300
Poaceae Puccinellia tenuiflora 2 Pt_Chr0503588, Pt_Chr0505370
Poaceae Sporobolus alterniflorus 6 Chr01G022100, Chr01G022110, Chr01G022120, Chr12G015780 ...
Chr18G006910, Chr22G010430
Poaceae Thinopyrum elongatum 4 Tel1E01G384200, Tel1E01G384300, Tel4E01G306000 ...
Tel7E01G089100
Poaceae Triticum dicoccoides 7 gene_TRIDC1AG034400, gene_TRIDC1AG034890 ...
gene_TRIDC1BG039840, gene_TRIDC1BG039850, gene_TRIDC4AG019240, gene_TRIDC4AG019290, gene_TRIDC4BG030460
Poaceae Triticum aestivum 11 TraesCS1A02G228500.1.cds1, TraesCS1A02G231700.1.cds1 ...
TraesCS1B02G242700.1.cds1, TraesCS1B02G242800.1.cds1, TraesCS1D02G230300.1.cds1, TraesCS1D02G230600.1.cds1, TraesCS4A02G137300.1.cds1, TraesCS4A02G137800.1.cds1, TraesCS4B02G167400.1.cds1, TraesCS4D02G169900.1.cds1, TraesCS4D02G170000.1.cds1
Poaceae Zea mays 6 Zm00001eb130430_P001, Zm00001eb285770_P001 ...
Zm00001eb285790_P001, Zm00001eb346450_P001, Zm00001eb346460_P001, Zm00001eb395020_P001
Poaceae Zoysia japonica 2 nbis-gene-48381, nbis-gene-48383
Poaceae Zoysia macrostachya 4 Zma_g10214, Zma_g26696, Zma_g26697, Zma_g3665
Solanaceae Lycium barbarum 1 gene-LOC132631530
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.