Basic Information
Locus ID:
gene-QOZ80_4AG0324970
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 32582737 | 32592540 | + | gene-QOZ80_4AG0324970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 202,332.77 Da | 49.40 | 87.09 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1459 | 1873 | 2.09558E-120 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1506 | 1878 | 1.7E-81 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 182 | 649 | 1.42E-42 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1451 | 1871 | 6.54E-95 | IPR035983 |
| Gene3D | G3DSA:1.25.10.10 | - | 171 | 493 | 1.3E-53 | IPR011989 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1400 | 1651 | 6.1E-43 | - |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1752 | 1876 | 1.9E-32 | - |
| SMART | SM00119 | hect_3 | 1473 | 1878 | 7.1E-87 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1483 | 1878 | 57.838921 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 963 | 1075 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 683 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1131 | 1165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1088 | 1102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1131 | 1152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1030 | 1072 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 716 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 963 | 1010 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1088 | 1111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 29 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_002447553.2 | E3 ubiquitin-protein ligase UPL3 [Sorghum bicolor] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TPJ3 | HECT-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_40379 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology