Basic Information
Locus ID:
gene-QOZ80_4AG0320830
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 19217601 | 19228435 | - | gene-QOZ80_4AG0320830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.87 | 83,409.75 Da | 44.35 | 95.47 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08771 | DLP_1 | 42 | 309 | 2.95212E-136 | IPR001401 |
| Pfam | PF01031 | Dynamin central region | 232 | 513 | 6.7E-96 | IPR000375 |
| Pfam | PF02212 | Dynamin GTPase effector domain | 626 | 714 | 1.7E-25 | IPR003130 |
| Pfam | PF00350 | Dynamin family | 47 | 221 | 7.4E-54 | IPR045063 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 20 | 318 | 3.11E-77 | IPR027417 |
| Gene3D | G3DSA:1.20.120.1240 | Dynamin, middle domain | 341 | 694 | 6.3E-84 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 18 | 319 | 2.5E-113 | IPR027417 |
| SMART | SM00302 | GED_2 | 623 | 714 | 1.5E-29 | IPR003130 |
| SMART | SM00053 | dynamin_3 | 17 | 261 | 8.3E-113 | IPR001401 |
| ProSiteProfiles | PS51718 | Dynamin-type guanine nucleotide-binding (G) domain profile. | 41 | 309 | 59.983494 | IPR030381 |
| ProSiteProfiles | PS51388 | GED domain profile. | 628 | 719 | 28.033442 | IPR020850 |
| PRINTS | PR00195 | Dynamin signature | 44 | 62 | 3.9E-55 | IPR022812 |
| PRINTS | PR00195 | Dynamin signature | 210 | 226 | 3.9E-55 | IPR022812 |
| PRINTS | PR00195 | Dynamin signature | 191 | 209 | 3.9E-55 | IPR022812 |
| PRINTS | PR00195 | Dynamin signature | 141 | 158 | 3.9E-55 | IPR022812 |
| PRINTS | PR00195 | Dynamin signature | 69 | 86 | 3.9E-55 | IPR022812 |
| PRINTS | PR00195 | Dynamin signature | 233 | 252 | 3.9E-55 | IPR022812 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 571 | - | - |
| Coils | Coil | Coil | 694 | 714 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G14120.2 | dynamin related protein. Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A. | 0 |
| RefSeq | XP_034605977.1 | dynamin-related protein 3A-like isoform X2 [Setaria viridis] | 0 |
| Q8LFT2 | Dynamin-related protein 3B OS=Arabidopsis thaliana OX=3702 GN=DRP3B PE=1 SV=2 | 0 | |
| TrEMBL | A0A4U6TR90 | Dynamin-related protein 3A OS=Setaria viridis OX=4556 GN=SEVIR_7G075400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg26358, jg30167 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_24151, gene_26319 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah009339, Ah027217 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_6g134060, BVRB_9g221380 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg10780, Sbi_jg12603, Sbi_jg47519, Sbi_jg53336 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg21769, Seu_jg8587 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00010427, GOSA_00018715 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl33658, Sgl38970, Sgl65549, Sgl65619, Sgl69872, Sgl69915 |
| Amaranthaceae | Chenopodium album | 8 | gene:ENSEOMG00000001447, gene:ENSEOMG00000002501 ... |
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.6AG0023190, CQ.Regalona.r1.6BG0024510 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30102360, pistato.v30251260 |
| Apiaceae | Apium graveolens | 4 | Ag1G00670, Ag1G00671, Ag1G00675, Ag9G00267 |
| Arecaceae | Cocos nucifera | 3 | COCNU_02G008760, COCNU_11G003050, COCNU_15G004760 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103710572, gene-LOC103716152 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_02.448.V1.1, AsparagusV1_09.959.V1.1 ... |
| Asteraceae | Flaveria trinervia | 1 | FtriNA23159 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G14120.3, AT4G33650.2 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10022566m.g.v1.0, Thhalv10024438m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g27480.v2.2, Sp7g31380.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB02g086410.2N, BniB03g009360.2N, BniB05g004450.2N |
| Casuarinaceae | Casuarina equisetifolia | 5 | Ceq03G2849, Ceq04G2497, Ceq04G2498, Ceq04G2499, Ceq09G0567 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl04G2725, Cgl04G2726, Cgl07G2100, Cgl09G0593 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno01g07420, gene.Cymno11g05250 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0633s00006.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g11470, gene.Thate04g10470 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-3893 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG05.566, evm.TU.LG05.766 |
| Plantaginaceae | Plantago ovata | 3 | Pov_00002165, Pov_00028749, Pov_00039734 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb3G18220, Lb4G21985, Lb8G35668 |
| Poaceae | Echinochloa crus-galli | 6 | AH02.4334, AH09.771, BH02.4362, BH09.781, CH01.5311 ... |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_1AG0044610, gene-QOZ80_1BG0094610 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0161510.1, HORVU.MOREX.r3.3HG0310450.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_043560 |
| Poaceae | Oryza coarctata | 3 | Oco01G028550, Oco02G029640, Oco08G003980 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g69130.1, LOC_Os04g31190.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G383000, gene-BS78_06G063700 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0303048, Pt_Chr0405907, Pt_Chr0600531, Pt_Chr0600539 |
| Poaceae | Sporobolus alterniflorus | 8 | Chr02G002460, Chr03G022880, Chr05G031980, Chr08G019150 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G503500, Tel3E01G680400 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG040650, gene_TRIDC2BG043660 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS2A02G281000.2, TraesCS2B02G298400.1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb085760_P005, Zm00001eb143240_P003 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-10988, nbis-gene-28339, nbis-gene-7907 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g11820, Zma_g21141, Zma_g9270 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG05.298, evm.TU.LG08.1072, evm.TU.LG22.813 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc03g13580, gene.Posoc04g11250 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.1949, evm.TU.Scaffold_2_RagTag.487 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5737 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-13629, nbisL1-mrna-2044 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3576, nbisL1-mrna-9691 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000009l.671, evm.TU.utg000016l.305 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016490 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-2595, nbisL1-mrna-4867 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-13892, nbisL1-mrna-16562 |
| Salicaceae | Populus euphratica | 3 | populus_peu22701, populus_peu24131, populus_peu37408 |
| Solanaceae | Lycium barbarum | 4 | gene-LOC132598854, gene-LOC132609453, gene-LOC132609454 ... |
| Solanaceae | Solanum chilense | 4 | SOLCI001249400, SOLCI004859400, SOLCI005038700 ... |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107004619, gene-LOC107008072, gene-LOC107028925 |
| Tamaricaceae | Reaumuria soongarica | 5 | STRG.20553_chr08_+, gene_12630, gene_16220, gene_2841 ... |
| Tamaricaceae | Tamarix chinensis | 4 | TC10G0591, TC10G0596, TC11G0658, TC12G0612 |
| Zosteraceae | Zostera marina | 2 | Zosma03g06250.v3.1, Zosma06g10030.v3.1 |