HalophFGD

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Basic Information
Locus ID: gene-QOZ80_4AG0312640
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr4A 9874329 9877088 - gene-QOZ80_4AG0312640
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.25 32,693.41 Da 60.16 105.82 -0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 29 65 1.1E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 26 66 4.19E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 13 66 9.8E-6 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002446938.1 F-box/FBD/LRR-repeat protein At5g22660 [Sorghum bicolor] 0
TrEMBL A0A5J9TVX6 F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_39018 PE=4 SV=1 0
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH09.1534, CH09.1649
Poaceae Eleusine coracana subsp. coracana 1 gene-QOZ80_4AG0312640
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.