Basic Information
Locus ID:
gene-QOZ80_4AG0311680
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 9294305 | 9299469 | + | gene-QOZ80_4AG0311680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 74,441.93 Da | 52.62 | 64.57 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 469 | 513 | 0.00527654 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 466 | 507 | 8.27E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 459 | 515 | 1.5E-12 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 372 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 362 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 406 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 641 | 667 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 634 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 214 | 236 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 275 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 466 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_002448127.1 | enolase-phosphatase E1 [Sorghum bicolor] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A811QVX8 | Sister chromatid cohesion protein PDS5 B-B OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS43809 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology