Basic Information
Locus ID:
gene-QOZ80_4AG0311270
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 8965203 | 8966615 | - | gene-QOZ80_4AG0311270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 51,375.45 Da | 26.60 | 119.04 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 63 | 2.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 301 | 2.61E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 234 | 466 | 1.07E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 309 | 5.0E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 238 | 5.9E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 173 | 8.0E-45 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 310 | 470 | 8.6E-46 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 77.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 355 | 378 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 115 | 15.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 163 | 81.0 | IPR003591 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33170.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_039775128.1 | LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At5g63930 [Panicum virgatum] | 0 |
| O49318 | Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana OX=3702 GN=At2g33170 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6Q6G5 | Putative leucine-rich repeat receptor-like protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM15G13680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0311270, gene-QOZ80_4BG0342480 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-2590 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12218, nbisL1-mrna-22882 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18159 |