Basic Information
Locus ID:
gene-QOZ80_4AG0309260
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 7528593 | 7534947 | - | gene-QOZ80_4AG0309260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 70,480.42 Da | 41.12 | 93.85 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 345 | 612 | 1.6E-19 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 17 | 57 | 5.8E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 16 | 220 | 8.32E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 329 | 614 | 6.06E-36 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 131 | 251 | 4.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 18 | 130 | 3.3E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 317 | 423 | 1.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 630 | 4.4E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 342 | 618 | 17.149502 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63430.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025824322.1 | probable LRR receptor-like serine/threonine-protein kinase At1g63430 [Panicum hallii] | 0 |
| C0LGH8 | Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana OX=3702 GN=At1g63430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CXZ0 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G226200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH09.1708, BH09.1892, CH09.2036 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0309260, gene-QOZ80_4BG0340270 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0184300.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_007607, gene-QYE76_045198 |
| Poaceae | Oryza coarctata | 2 | Oco07G011610, Oco08G011260 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g45170.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G171100 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0301887, Pt_Chr0301907, Pt_Chr0301910 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr23G007910, Chr25G006520, Chr26G011800, Chr30G006370 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G638800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG053330, gene_TRIDC2BG056190 |
| Poaceae | Triticum aestivum | 2 | TraesCS2A02G368700.2, TraesCS2B02G385900.1 |
| Poaceae | Zea mays | 1 | Zm00001eb075560_P005 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-5380 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21688 |