Basic Information
Locus ID:
gene-QOZ80_4AG0308990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 7341842 | 7343122 | + | gene-QOZ80_4AG0308990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.54 | 17,747.84 Da | 42.51 | 86.26 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00018 | SH3 domain | 123 | 161 | 6.6E-6 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 74 | 163 | 8.53E-11 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 7 | 70 | 1.31E-8 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 121 | 163 | 1.5E-9 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 3 | 82 | 1.2E-6 | IPR027267 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 116 | 163 | 14.676367 | IPR001452 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 94 | - | - |
| Coils | Coil | Coil | 32 | 52 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.2 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_021319736.1 | SH3 domain-containing protein 2 isoform X2 [Sorghum bicolor] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TV33 | SH3 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_38537 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology