Basic Information
Locus ID:
gene-QOZ80_4AG0307350
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the DEAD box helicase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 6243456 | 6244606 | + | gene-QOZ80_4AG0307350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 24,257.29 Da | 50.39 | 108.01 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00270 | DEAD/DEAH box helicase | 21 | 179 | 7.7E-28 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 2 | 197 | 2.48E-48 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 198 | 1.8E-50 | IPR027417 |
| SMART | SM00487 | ultradead3 | 15 | 208 | 3.9E-38 | IPR014001 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 27 | 194 | 21.430296 | IPR014001 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13920.3 | eukaryotic translation initiation factor 4A1. eukaryotic translation initiation factor 4A-1 | 0 |
| RefSeq | XP_051188696.1 | eukaryotic initiation factor 4A-like [Lolium perenne] | 0 |
| Q40466 | Eukaryotic initiation factor 4A-13 (Fragment) OS=Nicotiana tabacum OX=4097 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6V7QQZ8 | Helicase ATP-binding domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS28512 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology