Basic Information
Locus ID:
gene-QOZ80_4AG0305960
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
ABC transporter C family member 9
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 5204842 | 5211045 | - | gene-QOZ80_4AG0305960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 168,036.64 Da | 38.75 | 99.08 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18580 | ABC_6TM_ABCC_D2 | 927 | 1221 | 5.82147E-95 | IPR044726 |
| CDD | cd03244 | ABCC_MRP_domain2 | 1244 | 1464 | 5.20289E-122 | - |
| CDD | cd18579 | ABC_6TM_ABCC_D1 | 298 | 586 | 3.04856E-101 | IPR044746 |
| CDD | cd03250 | ABCC_MRP_domain1 | 612 | 812 | 3.95626E-107 | - |
| Pfam | PF00005 | ABC transporter | 630 | 764 | 2.7E-18 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 301 | 565 | 1.6E-25 | IPR011527 |
| Pfam | PF00005 | ABC transporter | 1263 | 1411 | 3.3E-27 | IPR003439 |
| Pfam | PF00664 | ABC transporter transmembrane region | 939 | 1173 | 1.5E-33 | IPR011527 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1238 | 1472 | 1.74E-65 | IPR027417 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 928 | 1226 | 1.05E-53 | IPR036640 |
| SUPERFAMILY | SSF90123 | ABC transporter transmembrane region | 297 | 594 | 2.49E-33 | IPR036640 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 606 | 829 | 4.72E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 610 | 841 | 1.0E-67 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1229 | 1482 | 2.0E-79 | IPR027417 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 891 | 1226 | 1.3E-59 | IPR036640 |
| Gene3D | G3DSA:1.20.1560.10 | ABC transporter type 1, transmembrane domain | 275 | 595 | 1.9E-46 | IPR036640 |
| SMART | SM00382 | AAA_5 | 1272 | 1464 | 2.2E-10 | IPR003593 |
| SMART | SM00382 | AAA_5 | 639 | 812 | 3.5E-10 | IPR003593 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 1248 | 1480 | 16.760174 | IPR003439 |
| ProSiteProfiles | PS50893 | ATP-binding cassette, ABC transporter-type domain profile. | 612 | 835 | 21.842182 | IPR003439 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 302 | 578 | 33.441822 | IPR011527 |
| ProSiteProfiles | PS50929 | ABC transporter integral membrane type-1 fused domain profile. | 929 | 1209 | 37.925327 | IPR011527 |
| ProSitePatterns | PS00211 | ABC transporters family signature. | 737 | 751 | - | IPR017871 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 846 | 904 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 884 | 904 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G60160.1 | multidrug resistance-associated protein 9. member of MRP subfamily | 0 |
| RefSeq | XP_039818018.1 | putative ABC transporter C family member 15 [Panicum virgatum] | 0 |
| Q9M1C7 | ABC transporter C family member 9 OS=Arabidopsis thaliana OX=3702 GN=ABCC9 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0Q4V0 | ABC transporter C family member 15 OS=Panicum virgatum OX=38727 GN=PVAP13_7NG311700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology