Basic Information
Locus ID:
gene-QOZ80_4AG0303360
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 3283561 | 3287782 | + | gene-QOZ80_4AG0303360 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 74,287.00 Da | 28.32 | 101.71 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 585 | 623 | 7.6E-11 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 1.1E-9 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 657 | 670 | 0.41 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 223 | 283 | 1.8E-6 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 125 | 147 | 1.5 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 466 | 517 | 1.7E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 293 | 518 | 7.6E-44 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 48 | 360 | 1.97E-52 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 583 | 676 | 6.63E-9 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 523 | 1.6E-60 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 193 | 3.5E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 583 | 679 | 4.4E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 291 | 1.5E-23 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 246 | 278 | 540.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 480 | 503 | 22.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 656 | 671 | 250.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 197 | 227 | 100.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 504 | 524 | 18.0 | - |
| SMART | SM00369 | LRR_typ_2 | 656 | 680 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 246 | 270 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 480 | 504 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 160.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 482 | 504 | 7.665751 | IPR001611 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 656 | 669 | 8.8E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 483 | 496 | 8.8E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 0 |
| Q658G7 | LRR receptor-like serine/threonine-protein kinase SIK1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0TBW1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG061843 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology