Basic Information
Locus ID:
gene-QOZ80_4AG0303320
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 3261701 | 3262780 | - | gene-QOZ80_4AG0303320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 39,697.83 Da | 36.85 | 86.60 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18280 | BTB_POZ_BPM_plant | 175 | 291 | 9.94346E-48 | - |
| CDD | cd00121 | MATH | 30 | 155 | 7.59761E-21 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 180 | 293 | 8.0E-26 | IPR000210 |
| Pfam | PF00917 | MATH domain | 36 | 154 | 1.1E-6 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 171 | 292 | 1.44E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 27 | 164 | 2.78E-25 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 159 | 1.0E-22 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 293 | 359 | 3.4E-20 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 165 | 288 | 9.7E-36 | IPR011333 |
| SMART | SM00061 | math_3 | 33 | 137 | 7.6E-8 | IPR002083 |
| SMART | SM00225 | BTB_4 | 189 | 294 | 3.0E-22 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 154 | 18.780064 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 189 | 256 | 16.631374 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004978248.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QCP1 | BTB/POZ and MATH domain-containing protein 2-like OS=Panicum miliaceum OX=4540 GN=C2845_PM15G22660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology