Basic Information
Locus ID:
gene-QOZ80_4AG0303290
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 3230005 | 3232578 | - | gene-QOZ80_4AG0303290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 47,482.48 Da | 34.62 | 82.48 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 33 | 131 | 1.66493E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 165 | 202 | 5.0E-7 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 274 | 365 | 1.7E-16 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 222 | 270 | 1.08E-7 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 208 | 1.33E-13 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 274 | 365 | 1.69E-20 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 28 | 139 | 6.38E-17 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 137 | 237 | 8.1E-16 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 29 | 98 | 2.2E-7 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 242 | 367 | 5.7E-22 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 368 | 435 | 1.0E-14 | - |
| SMART | SM00225 | BTB_4 | 256 | 367 | 2.4E-14 | IPR000210 |
| SMART | SM00225 | BTB_4 | 170 | 246 | 9.7 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 256 | 328 | 14.542491 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 30 | 87 | 9.24264 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 170 | 196 | 10.654275 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.2 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_025825436.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6U0D6 | BTB domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G256900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303290, gene-QOZ80_4BG0334190 |