Basic Information
Locus ID:
gene-QOZ80_4AG0303280
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 3224254 | 3228907 | - | gene-QOZ80_4AG0303280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 69,965.56 Da | 30.27 | 92.93 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 14 | 113 | 1.83758E-17 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 454 | 565 | 2.59805E-46 | - |
| CDD | cd00121 | MATH | 312 | 429 | 6.73203E-23 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 145 | 214 | 1.9E-11 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 458 | 567 | 4.6E-26 | IPR000210 |
| Pfam | PF00917 | MATH domain | 318 | 428 | 1.2E-7 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 448 | 566 | 7.07E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 12 | 116 | 4.74E-20 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 141 | 214 | 6.48E-13 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 309 | 440 | 1.24E-26 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 136 | 216 | 9.3E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 442 | 562 | 4.0E-37 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 567 | 632 | 2.9E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 308 | 436 | 4.9E-27 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 217 | 293 | 1.1E-13 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 7 | 115 | 3.1E-18 | IPR008974 |
| SMART | SM00225 | BTB_4 | 466 | 568 | 1.5E-22 | IPR000210 |
| SMART | SM00061 | math_3 | 314 | 414 | 5.6E-11 | IPR002083 |
| SMART | SM00225 | BTB_4 | 104 | 216 | 0.001 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 1 | 112 | 18.012978 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 309 | 431 | 21.362583 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 466 | 529 | 16.155687 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_004978248.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TYF5 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303280, gene-QOZ80_4BG0334170 |