Basic Information
Locus ID:
gene-QOZ80_4AG0300840
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 1686968 | 1688014 | - | gene-QOZ80_4AG0300840 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 39,377.32 Da | 40.41 | 69.86 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 24 | 152 | 3.7853E-22 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 192 | 309 | 1.5E-16 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 21 | 156 | 6.54E-29 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 181 | 309 | 3.92E-20 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 159 | 341 | 7.3E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 156 | 4.7E-27 | IPR008974 |
| SMART | SM00225 | BTB_4 | 194 | 311 | 7.7E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 194 | 273 | 13.508391 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 22 | 152 | 20.774485 | IPR002083 |
| Coils | Coil | Coil | 328 | 348 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_025825460.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum hallii] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PTH7 | BTB/POZ and MATH domain-containing protein 1-like OS=Panicum miliaceum OX=4540 GN=C2845_PM16G22750 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0300840, gene-QOZ80_4BG0331550 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0199930.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_047063, gene-QYE76_055297, gene-QYE76_060667 ... |
| Poaceae | Oryza coarctata | 2 | Oco07G018090, Oco08G017470 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g56460.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G267800 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G016540, Chr23G001910, Chr26G017400 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G823800, Tel2E01G845000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG070360, gene_TRIDC2BG076060 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G500000.1.cds1, TraesCS2B02G513200.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-24472, nbis-gene-6092 |