HalophFGD

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Basic Information
Locus ID: gene-QOZ80_3BG0297760
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: F-box protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr3B 64005947 64006883 - gene-QOZ80_3BG0297760
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.80 22,738.59 Da 48.03 100.24 0.12
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 22 57 1.2E-7 IPR001810
SUPERFAMILY SSF81383 F-box domain 21 74 7.06E-12 IPR036047
Gene3D G3DSA:1.20.1280.50 - 19 55 4.2E-7 -
SMART SM00256 fbox_2 20 60 2.6E-6 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G12870.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_006662318.2 F-box/LRR-repeat protein At2g43260-like [Oryza brachyantha] 0
Swiss-Prot Q9LPW2 Putative F-box/kelch-repeat protein At1g12870 OS=Arabidopsis thaliana OX=3702 GN=At1g12870 PE=4 SV=2 0
TrEMBL A0A3L6S6H8 F-box/LRR-repeat protein OS=Panicum miliaceum OX=4540 GN=C2845_PM02G15140 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Arecaceae Phoenix dactylifera 1 gene-LOC103709993
Asparagaceae Asparagus officinalis 1 AsparagusV1_06.187.V1.1
Poaceae Echinochloa crus-galli 24 AH02.2990, AH07.122, AH07.134, AH09.801, BH01.2596, BH07.313 ...
BH05.3914, BH05.3915, BH06.2751, BH07.2057, BH07.71, BH09.200, CH01.2792, CH02.1075, CH03.4547, CH03.4708, CH03.4731, CH03.4734, CH03.4757, CH03.4758, CH04.1894, CH05.2057, CH05.4128, CH05.4444
Poaceae Eleusine coracana subsp. coracana 13 gene-QOZ80_1BG0057680, gene-QOZ80_2AG0105300 ...
gene-QOZ80_2BG0152490, gene-QOZ80_3BG0286140, gene-QOZ80_3BG0297760, gene-QOZ80_4AG0320530, gene-QOZ80_4AG0320550, gene-QOZ80_4AG0322110, gene-QOZ80_4AG0322130, gene-QOZ80_4BG0348890, gene-QOZ80_4BG0351940, gene-QOZ80_4BG0351950, gene-QOZ80_6AG0536790
Poaceae Hordeum vulgare 11 HORVU.MOREX.r3.2HG0122350.1.CDS1 ...
HORVU.MOREX.r3.2HG0132050.1.CDS1, HORVU.MOREX.r3.2HG0168030.1.CDS1, HORVU.MOREX.r3.2HG0168040.1.CDS1, HORVU.MOREX.r3.2HG0194150.1.CDS1, HORVU.MOREX.r3.2HG0194780.1.CDS1, HORVU.MOREX.r3.3HG0221170.1.CDS1, HORVU.MOREX.r3.5HG0530150.1.CDS1, HORVU.MOREX.r3.6HG0543810.1.CDS1, HORVU.MOREX.r3.7HG0637410.1.CDS1, HORVU.MOREX.r3.7HG0637430.1.CDS1
Poaceae Lolium multiflorum 28 gene-QYE76_006812, gene-QYE76_018860, gene-QYE76_025880 ...
gene-QYE76_026959, gene-QYE76_026965, gene-QYE76_036377, gene-QYE76_036382, gene-QYE76_037512, gene-QYE76_038561, gene-QYE76_039703, gene-QYE76_039705, gene-QYE76_043546, gene-QYE76_044498, gene-QYE76_048448, gene-QYE76_049122, gene-QYE76_049815, gene-QYE76_052134, gene-QYE76_057658, gene-QYE76_057659, gene-QYE76_057662, gene-QYE76_057663, gene-QYE76_057664, gene-QYE76_058817, gene-QYE76_058828, gene-QYE76_060553, gene-QYE76_061038, gene-QYE76_066315, gene-QYE76_071663
Poaceae Oryza coarctata 12 Oco01G010480, Oco01G023330, Oco02G015220, Oco03G010080 ...
Oco05G014210, Oco07G003900, Oco07G003910, Oco07G004650, Oco12G003190, Oco12G003280, Oco18G006330, Oco23G002440
Poaceae Oryza sativa 18 LOC_Os01g45020.2, LOC_Os02g15680.1, LOC_Os02g27400.1 ...
LOC_Os02g51580.1, LOC_Os03g25080.1, LOC_Os04g31530.1, LOC_Os04g31540.1, LOC_Os04g31570.1, LOC_Os06g07380.1, LOC_Os06g07450.1, LOC_Os06g07460.1, LOC_Os06g19670.1, LOC_Os08g29400.1, LOC_Os09g27520.1, LOC_Os09g27570.1, LOC_Os09g27660.3, LOC_Os10g24870.1, LOC_Os12g38090.1
Poaceae Paspalum vaginatum 8 gene-BS78_03G214100, gene-BS78_03G214200 ...
gene-BS78_04G106800, gene-BS78_06G017700, gene-BS78_06G065900, gene-BS78_09G211600, gene-BS78_10G223700, gene-BS78_10G275800
Poaceae Puccinellia tenuiflora 23 Pt_Chr0100567, Pt_Chr0100612, Pt_Chr0101012, Pt_Chr0204969 ...
Pt_Chr0204971, Pt_Chr0206814, Pt_Chr0305310, Pt_Chr0305585, Pt_Chr0305651, Pt_Chr0305654, Pt_Chr0401364, Pt_Chr0500386, Pt_Chr0500513, Pt_Chr0500567, Pt_Chr0501495, Pt_Chr0501772, Pt_Chr0501783, Pt_Chr0603263, Pt_Chr0605307, Pt_Chr0605309, Pt_Chr0703331, Pt_Chr0703332, Pt_Ctg00334
Poaceae Sporobolus alterniflorus 10 Chr06G014710, Chr15G016750, Chr15G024360, Chr19G008640 ...
Chr20G006730, Chr23G015000, Chr26G004820, Chr27G007850, Chr27G007860, Chr29G006440
Poaceae Thinopyrum elongatum 11 Tel2E01G205100, Tel2E01G562900, Tel2E01G764100 ...
Tel2E01G788800, Tel3E01G082500, Tel3E01G810100, Tel5E01G799100, Tel6E01G117000, Tel6E01G363400, Tel7E01G056400, Telscf40501G000100
Poaceae Triticum dicoccoides 6 gene_TRIDC1BG061400, gene_TRIDC3AG074610 ...
gene_TRIDC3BG030670, gene_TRIDC3BG030700, gene_TRIDC6BG030800, gene_TRIDC7AG078480
Poaceae Triticum aestivum 43 TraesCS2A02G341300.1.cds1, TraesCS2B02G104500.1.cds1 ...
TraesCS2B02G151400.1.cds1, TraesCS2B02G196900.1, TraesCS2B02G339000.1, TraesCS2B02G490300.1.cds1, TraesCS2D02G093200.1.cds1, TraesCS2D02G131500.1.cds1, TraesCS2D02G318900.1.cds1, TraesCS2D02G441600.1.cds1, TraesCS2D02G441700.1.cds1, TraesCS2D02G449800.1, TraesCS3A02G001000.1.cds1, TraesCS3A02G037400.1.cds1, TraesCS3A02G526900.1.cds1, TraesCS3B02G002100.1.cds1, TraesCS3B02G046300.1.cds1, TraesCS3B02G046400.1.cds1, TraesCS3B02G178900.1, TraesCS3B02G179000.1.cds1, TraesCS3B02G210700.1, TraesCS3B02G210800.1, TraesCS3D02G042200.1.cds1, TraesCS3D02G532600.1.cds1, TraesCS4A02G356900.1, TraesCS4A02G461900.1.cds1, TraesCS4B02G001400.1.cds1, TraesCS4B02G060900.1.cds1, TraesCS4B02G061700.1.cds1, TraesCS5A02G197600.1.cds1, TraesCS5A02G200300.1, TraesCS5B02G198900.1.cds1, TraesCS5B02G515700.1.cds1, TraesCS5D02G030900.1.cds1, TraesCS6B02G201900.1, TraesCS6B02G202100.1, TraesCS7A02G027600.1.cds1, TraesCS7A02G569200.1.cds1, TraesCS7B02G489400.1.cds1, TraesCS7D02G009500.1.cds1, TraesCSU02G055600.1.cds1, TraesCSU02G184600.1.cds1, TraesCSU02G184700.1.cds1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.