Basic Information
Locus ID:
gene-QOZ80_3BG0297420
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 63810802 | 63813289 | - | gene-QOZ80_3BG0297420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 59,620.97 Da | 51.43 | 64.95 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 413 | 453 | 4.79028E-19 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 411 | 457 | 1.6E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 413 | 459 | 1.61E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 390 | 461 | 3.5E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 414 | 453 | 10.600894 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 184 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_022685551.1 | uncharacterized protein LOC101779219 [Setaria italica] | 0 |
| TrEMBL | A0A5J9WL43 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology