Basic Information
Locus ID:
gene-QOZ80_3BG0288740
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 58184487 | 58187269 | + | gene-QOZ80_3BG0288740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.24 | 79,110.16 Da | 46.80 | 78.98 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 308 | 342 | 1.91082E-4 | - |
| Pfam | PF00069 | Protein kinase domain | 420 | 682 | 1.4E-38 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 36 | 85 | 9.4E-11 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 692 | 2.05E-60 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 307 | 344 | 1.68E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 257 | 310 | 2.1E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 706 | 1.9E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 395 | 492 | 2.0E-22 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 311 | 350 | 6.8E-7 | - |
| SMART | SM00181 | egf_5 | 311 | 349 | 21.0 | IPR000742 |
| SMART | SM00220 | serkin_6 | 416 | 685 | 4.5E-13 | IPR000719 |
| SMART | SM00179 | egfca_6 | 308 | 349 | 1.4E-4 | IPR001881 |
| SMART | SM00181 | egf_5 | 259 | 307 | 1.6 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 685 | 30.873615 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 422 | 444 | - | IPR017441 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 308 | 333 | - | IPR018097 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 540 | 552 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_034576745.1 | wall-associated receptor kinase 4-like [Setaria viridis] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368STT3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_9G486100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology