Basic Information
Locus ID:
gene-QOZ80_3BG0286460
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
GTPase-activator protein for Rho-like GTPases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 56457970 | 56463602 | + | gene-QOZ80_3BG0286460 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 83,585.47 Da | 54.69 | 78.16 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00159 | RhoGAP | 46 | 183 | 2.32094E-25 | - |
| Pfam | PF00620 | RhoGAP domain | 46 | 189 | 1.6E-25 | IPR000198 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 456 | 536 | 6.5E-19 | IPR025757 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 45 | 239 | 2.16E-30 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 16 | 238 | 2.1E-35 | IPR008936 |
| SMART | SM00324 | RhoGAP_3 | 43 | 233 | 7.5E-22 | IPR000198 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 37 | 236 | 26.391973 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 605 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 754 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 611 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 374 | - | - |
| Coils | Coil | Coil | 505 | 532 | - | - |
| Coils | Coil | Coil | 413 | 486 | - | - |
| Coils | Coil | Coil | 714 | 741 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24580.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a Rho GTPase-activating protein that interacts with ROP1 (a Rho GTPase) and regulates pollen tube development. This protein can be observed at the apical tip of growing pollen tubes and on endocytic vesicles traveling to this region of the pollen tube. | 0 |
| RefSeq | XP_035818022.1 | uncharacterized protein LOC100217254 isoform X1 [Zea mays] | 0 |
| F4JQZ3 | Rho GTPase-activating protein REN1 OS=Arabidopsis thaliana OX=3702 GN=REN1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9WIJ3 | Rho GTPase-activating protein REN1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_07293 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology