Basic Information
Locus ID:
gene-QOZ80_3BG0283550
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 54145486 | 54150947 | + | gene-QOZ80_3BG0283550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 117,380.71 Da | 31.11 | 87.10 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01490 | Ube1_repeat2 | 478 | 1017 | 0.0 | - |
| CDD | cd01491 | Ube1_repeat1 | 60 | 446 | 8.24604E-134 | - |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 307 | 376 | 5.8E-17 | IPR032420 |
| Pfam | PF09358 | Ubiquitin fold domain | 970 | 1059 | 3.4E-21 | IPR018965 |
| Pfam | PF00899 | ThiF family | 459 | 958 | 5.9E-67 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 646 | 899 | 2.5E-81 | IPR019572 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 235 | 306 | 1.6E-25 | IPR032418 |
| Pfam | PF00899 | ThiF family | 62 | 437 | 3.7E-26 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 55 | 444 | 3.01E-95 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 454 | 954 | 1.23E-121 | IPR035985 |
| Gene3D | G3DSA:3.40.50.12550 | - | 179 | 469 | 1.7E-105 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 479 | 958 | 3.3E-181 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 631 | 906 | 3.3E-181 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 223 | 304 | 1.7E-105 | IPR042302 |
| Gene3D | G3DSA:3.10.290.60 | - | 972 | 1062 | 1.8E-19 | IPR038252 |
| Gene3D | G3DSA:3.50.50.80 | - | 53 | 169 | 1.6E-34 | IPR042449 |
| SMART | SM00985 | UBA_e1_C_a_2 | 937 | 1059 | 8.2E-42 | IPR018965 |
| TIGRFAM | TIGR01408 | Ube1: ubiquitin-activating enzyme E1 | 55 | 1063 | 0.0 | IPR018075 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 421 | 429 | - | IPR018074 |
| ProSitePatterns | PS00865 | Ubiquitin-activating enzyme active site. | 638 | 646 | - | IPR033127 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 707 | 734 | 1.8E-60 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 82 | 106 | 1.8E-60 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 197 | 224 | 1.8E-60 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 506 | 529 | 1.8E-60 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 553 | 578 | 1.8E-60 | IPR000011 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_025795865.1 | ubiquitin-activating enzyme E1 3-like isoform X1 [Panicum hallii] | 0 |
| P31252 | Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum OX=4565 GN=UBA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WF91 | E1 ubiquitin-activating enzyme (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_07002 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology