Basic Information
Locus ID:
gene-QOZ80_3BG0281220
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
DWNN domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 52313815 | 52315182 | - | gene-QOZ80_3BG0281220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 48,940.08 Da | 55.14 | 54.95 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16620 | vRING-HC-C4C4_RBBP6 | 218 | 259 | 6.57079E-12 | - |
| Pfam | PF13696 | Zinc knuckle | 158 | 178 | 3.8E-10 | IPR025829 |
| Pfam | PF08783 | DWNN domain | 3 | 81 | 6.7E-18 | IPR014891 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 142 | 180 | 6.8E-5 | IPR036875 |
| SUPERFAMILY | SSF57850 | RING/U-box | 211 | 282 | 1.53E-10 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 84 | 2.5E-17 | - |
| Gene3D | G3DSA:4.10.60.10 | - | 156 | 203 | 1.0E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 204 | 298 | 8.5E-12 | IPR013083 |
| SMART | SM01180 | DWNN_2 | 3 | 82 | 8.2E-29 | IPR014891 |
| ProSiteProfiles | PS51282 | DWNN domain profile. | 3 | 82 | 15.5291 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 358 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 195 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 320 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.3 | DWNN domain, a CCHC-type zinc finger. | 0 |
| RefSeq | XP_034570947.1 | E3 ubiquitin ligase PQT3-like [Setaria viridis] | 0 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VSI6 | DWNN domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12534 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology