Basic Information
Locus ID:
gene-QOZ80_3BG0279500
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 50723011 | 50730597 | - | gene-QOZ80_3BG0279500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 92,721.85 Da | 51.73 | 74.95 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 6 | 96 | 4.06908E-11 | - |
| CDD | cd00159 | RhoGAP | 157 | 296 | 2.83968E-32 | - |
| Pfam | PF00169 | PH domain | 11 | 100 | 1.5E-11 | IPR001849 |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 584 | 664 | 7.5E-21 | IPR025757 |
| Pfam | PF00620 | RhoGAP domain | 157 | 301 | 8.0E-31 | IPR000198 |
| SUPERFAMILY | SSF50729 | PH domain-like | 6 | 107 | 1.26E-15 | - |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 157 | 350 | 1.24E-33 | IPR008936 |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 127 | 350 | 2.2E-41 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 3 | 110 | 4.7E-14 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 154 | 345 | 2.6E-25 | IPR000198 |
| SMART | SM00233 | PH_update | 3 | 103 | 1.3E-9 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 1 | 101 | 13.9371 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 148 | 348 | 30.785685 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 497 | 532 | - | - |
| Coils | Coil | Coil | 542 | 569 | - | - |
| Coils | Coil | Coil | 788 | 808 | - | - |
| Coils | Coil | Coil | 574 | 608 | - | - |
| Coils | Coil | Coil | 633 | 667 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_025794933.1 | rho GTPase-activating protein 7-like isoform X2 [Panicum hallii] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WI93 | Rho GTPase-activating protein 7-like OS=Eragrostis curvula OX=38414 GN=EJB05_06580 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology