Basic Information
Locus ID:
gene-QOZ80_3BG0277040
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 46699882 | 46705252 | + | gene-QOZ80_3BG0277040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 78,647.31 Da | 39.70 | 85.33 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 429 | 697 | 9.2E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 116 | 174 | 2.3E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 67 | 2.0E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 237 | 3.23E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 407 | 698 | 3.13E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 390 | 504 | 6.2E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 257 | 2.1E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 505 | 713 | 5.0E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 162 | 185 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 186 | 213 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 139 | 161 | 13.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 141 | 162 | 7.681152 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 427 | 701 | 34.011364 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 433 | 456 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_039785771.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum virgatum] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9BBA1 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology