HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QOZ80_3BG0275070
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Belongs to the ClpA ClpB family
Maps and Mapping Data
Chromosome Start End Strand ID
chr3B 38956055 38961699 - gene-QOZ80_3BG0275070
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.25 108,274.36 Da 39.14 90.00 -0.41
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00009 AAA 257 412 1.19527E-22 -
CDD cd00009 AAA 651 809 4.84917E-20 -
Pfam PF17871 AAA lid domain 418 520 6.0E-33 IPR041546
Pfam PF02861 Clp amino terminal domain, pathogenicity island component 170 221 3.3E-13 IPR004176
Pfam PF07724 AAA domain (Cdc48 subfamily) 676 844 1.4E-56 IPR003959
Pfam PF02861 Clp amino terminal domain, pathogenicity island component 95 144 1.7E-14 IPR004176
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 851 930 1.2E-25 IPR019489
Pfam PF00004 ATPase family associated with various cellular activities (AAA) 279 411 2.1E-13 IPR003959
SUPERFAMILY SSF81923 Double Clp-N motif 81 232 2.26E-37 IPR036628
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 235 625 3.6E-101 IPR027417
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases 626 930 1.88E-82 IPR027417
Gene3D G3DSA:1.10.1780.10 - 78 224 1.1E-35 IPR036628
Gene3D G3DSA:3.40.50.300 - 225 418 6.3E-86 IPR027417
Gene3D G3DSA:3.40.50.300 - 629 849 6.9E-91 IPR027417
Gene3D G3DSA:3.40.50.300 - 419 624 4.6E-70 IPR027417
Gene3D G3DSA:1.10.8.60 - 851 944 2.9E-27 -
SMART SM00382 AAA_5 677 844 5.7E-11 IPR003593
SMART SM01086 ClpB_D2_small_2 851 945 3.1E-33 IPR019489
SMART SM00382 AAA_5 274 418 1.2E-10 IPR003593
TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 82 934 0.0 IPR017730
ProSiteProfiles PS51903 Clp repeat (R) domain profile. 78 222 49.117645 IPR004176
ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 370 382 - IPR018368
ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 711 729 - IPR028299
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 788 802 1.0E-40 IPR001270
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 726 744 1.0E-40 IPR001270
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 681 699 1.0E-40 IPR001270
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 755 773 1.0E-40 IPR001270
Coils Coil Coil 97 117 - -
Coils Coil Coil 548 575 - -
Coils Coil Coil 517 537 - -
Coils Coil Coil 582 609 - -
Gene Ontology
Biological Process:
GO:0009408 (response to heat) GO:0042026 (protein refolding)
Molecular Function:
GO:0005524 (ATP binding) GO:0016887 (ATP hydrolysis activity)
Cellular Component:
GO:0005737 (cytoplasm)
KEGG Pathway
KO Term:
K03695 (ATP-dependent Clp protease ATP-binding subunit ClpB)
Pathway:
ko04213 (Longevity regulating pathway - multiple species) map04213 (Longevity regulating pathway - multiple species)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G15450.1 casein lytic proteinase B3. Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. 0
RefSeq XP_039785638.1 chaperone protein ClpB2, chloroplastic isoform X1 [Panicum virgatum] 0
Swiss-Prot Q75GT3 Chaperone protein ClpB2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPB2 PE=2 SV=1 0
TrEMBL A0A0A9CJC5 Chaperone clpb, putative OS=Arundo donax OX=35708 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 13 jg13160, jg13425, jg18387, jg19766, jg25515, jg27096 ...
jg28221, jg28222, jg30550, jg33480, jg36180, jg36559, jg39199
Aizoaceae Mesembryanthemum crystallinum 8 gene_14325, gene_18385, gene_1908, gene_19685, gene_19775 ...
gene_4256, gene_4257, gene_8194
Amaranthaceae Atriplex hortensis 6 Ah000738, Ah001570, Ah009875, Ah014262, Ah032951, Ah034830
Amaranthaceae Beta vulgaris 6 BVRB_2g031280, BVRB_2g039750, BVRB_5g113350, BVRB_8g193070 ...
BVRB_8g193120, BVRB_8g193140
Amaranthaceae Salicornia bigelovii 11 Sbi_jg21068, Sbi_jg22732, Sbi_jg25554, Sbi_jg29686 ...
Sbi_jg30831, Sbi_jg31013, Sbi_jg43209, Sbi_jg58267, Sbi_jg58432, Sbi_jg9375, Sbi_jg9376
Amaranthaceae Salicornia europaea 5 Seu_jg16607, Seu_jg18683, Seu_jg19232, Seu_jg25872 ...
Seu_jg28307
Amaranthaceae Suaeda aralocaspica 6 GOSA_00004435, GOSA_00004735, GOSA_00004884, GOSA_00011043 ...
GOSA_00018280, GOSA_00028565
Amaranthaceae Suaeda glauca 22 Sgl00880, Sgl03246, Sgl05834, Sgl12930, Sgl18162, Sgl25028 ...
Sgl30167, Sgl36005, Sgl41923, Sgl41924, Sgl45207, Sgl46720, Sgl49981, Sgl54807, Sgl54808, Sgl54968, Sgl60111, Sgl60227, Sgl62402, Sgl66494, Sgl66951, Sgl70829
Amaranthaceae Chenopodium album 13 gene:ENSEOMG00000006740, gene:ENSEOMG00000006928 ...
gene:ENSEOMG00000015140, gene:ENSEOMG00000016934, gene:ENSEOMG00000017665, gene:ENSEOMG00000020440, gene:ENSEOMG00000021447, gene:ENSEOMG00000022573, gene:ENSEOMG00000023885, gene:ENSEOMG00000024379, gene:ENSEOMG00000045263, gene:ENSEOMG00000051253, gene:ENSEOMG00000051466
Amaranthaceae Chenopodium quinoa 12 CQ.Regalona.r1.1BG0021930, CQ.Regalona.r1.2AG0007220 ...
CQ.Regalona.r1.2AG0023730, CQ.Regalona.r1.2BG0008470, CQ.Regalona.r1.5AG0017940, CQ.Regalona.r1.5AG0019600, CQ.Regalona.r1.5BG0019050, CQ.Regalona.r1.5BG0020950, CQ.Regalona.r1.7AG0003810, CQ.Regalona.r1.7BG0004660, CQ.Regalona.r1.8AG0022700, CQ.Regalona.r1.8BG0019710
Anacardiaceae Pistacia vera 10 pistato.v30012470, pistato.v30012830, pistato.v30021290 ...
pistato.v30144840, pistato.v30175880, pistato.v30194080, pistato.v30250820, pistato.v30271220, pistato.v30271230, pistato.v30271250
Apiaceae Apium graveolens 11 Ag4G00019, Ag4G00054, Ag4G00943, Ag4G02309, Ag5G00088 ...
Ag5G00230, Ag6G02415, Ag6G02418, Ag9G00396, Ag9G01096, Ag9G01241
Arecaceae Cocos nucifera 8 COCNU_02G015630, COCNU_02G016200, COCNU_04G009010 ...
COCNU_05G002200, COCNU_06G004430, COCNU_11G001710, COCNU_14G002750, COCNU_15G005760
Arecaceae Phoenix dactylifera 8 gene-LOC103697332, gene-LOC103708061, gene-LOC103709261 ...
gene-LOC103712232, gene-LOC103717858, gene-LOC103722025, gene-LOC103722794, gene-LOC103723359
Asparagaceae Asparagus officinalis 10 AsparagusV1_03.2572.V1.1, AsparagusV1_04.1550.V1.1 ...
AsparagusV1_05.2976.V1.1, AsparagusV1_05.3365.V1.1, AsparagusV1_06.705.V1.1, AsparagusV1_08.1413.V1.1, AsparagusV1_09.1557.V1.1, AsparagusV1_09.1558.V1.1, AsparagusV1_10.436.V1.1, AsparagusV1_Unassigned.440.V1.1
Asteraceae Flaveria trinervia 10 Ftri13G12503, Ftri16G22519, Ftri18G00991, Ftri18G04469 ...
Ftri18G17563, Ftri18G19288, Ftri1G09788, Ftri1G13252, Ftri2G32701, Ftri6G12417
Brassicaceae Arabidopsis thaliana 8 AT1G74310.1, AT2G25140.1, AT3G45450.1, AT3G48870.1 ...
AT4G14670.1, AT5G15450.1, AT5G50920.1, AT5G51070.1
Brassicaceae Eutrema salsugineum 8 Thhalv10000031m.g.v1.0, Thhalv10000463m.g.v1.0 ...
Thhalv10010105m.g.v1.0, Thhalv10010143m.g.v1.0, Thhalv10012591m.g.v1.0, Thhalv10012593m.g.v1.0, Thhalv10012603m.g.v1.0, Thhalv10018095m.g.v1.0
Brassicaceae Schrenkiella parvula 6 Sp4g04130.v2.2, Sp5g13180.v2.2, Sp5g29470.v2.2 ...
Sp6g13090.v2.2, Sp6g13260.v2.2, Sp6g28650.v2.2
Brassicaceae Brassica nigra 13 BniB01g018200.2N, BniB02g023340.2N, BniB02g047440.2N ...
BniB03g052800.2N, BniB05g023270.2N, BniB05g048780.2N, BniB06g047920.2N, BniB06g049240.2N, BniB08g018140.2N, BniB08g018290.2N, BniB08g054470.2N, BniB08g062080.2N, BniB08g066250.2N
Casuarinaceae Casuarina equisetifolia 9 Ceq01G1807, Ceq01G1810, Ceq01G1947, Ceq02G2768, Ceq03G2900 ...
Ceq03G2901, Ceq04G2424, Ceq08G0369, Ceq08G0373
Casuarinaceae Casuarina glauca 10 Cgl01G0819, Cgl01G0822, Cgl01G1977, Cgl01G1980, Cgl01G2111 ...
Cgl02G2873, Cgl03G3045, Cgl04G2628, Cgl08G0326, Cgl08G0328
Cymodoceaceae Cymodocea nodosa 4 gene.Cymno01g02220, gene.Cymno03g09720, gene.Cymno08g00100 ...
gene.Cymno18g02480
Dunaliellaceae Dunaliella salina 9 Dusal.0027s00013.v1.0, Dusal.0027s00014.v1.0 ...
Dusal.0088s00005.v1.0, Dusal.0219s00011.v1.0, Dusal.0238s00006.v1.0, Dusal.0384s00010.v1.0, Dusal.0523s00008.v1.0, Dusal.0523s00009.v1.0, Dusal.1244s00001.v1.0
Hydrocharitaceae Thalassia testudinum 6 gene.Thate01g25160, gene.Thate02g20590, gene.Thate05g01190 ...
gene.Thate07g07710, gene.Thate09g11940, gene.Thate09g16120
Nitrariaceae Nitraria sibirica 8 evm.TU.LG02.267, evm.TU.LG05.522, evm.TU.LG05.573 ...
evm.TU.LG05.74, evm.TU.LG05.75, evm.TU.LG07.1514, evm.TU.LG10.565, evm.TU.LG12.664
Plantaginaceae Plantago ovata 7 Pov_00004761, Pov_00018806, Pov_00022098, Pov_00022099 ...
Pov_00032903, Pov_00033063, Pov_00033065
Plumbaginaceae Limonium bicolor 5 Lb1G02166, Lb1G02963, Lb2G12462, Lb2G12466, Lb2G12823
Poaceae Echinochloa crus-galli 49 AH01.3358, AH01.5302, AH01.5365, AH02.564, AH03.3584 ...
AH03.829, AH05.1698, AH07.2003, AH07.2087, AH07.2088, AH07.2089, AH07.602, BH01.1448, BH01.3653, BH02.3233, BH03.3800, BH03.943, BH05.1846, BH07.1971, BH07.2043, BH07.2044, BH07.2046, BH07.2047, BH07.2048, BH07.2115, BH07.723, BH08.211, BH09.1812, BH09.886, BH09.947, CH01.3836, CH01.3946, CH02.3290, CH03.1085, CH03.4021, CH05.1944, CH05.3036, CH06.550, CH07.1831, CH07.1894, CH07.1896, CH07.1899, CH07.1916, CH07.2024, CH08.203, CH08.249, CH09.1059, CH09.1943, CH09.988
Poaceae Eleusine coracana subsp. coracana 27 gene-QOZ80_1AG0032910, gene-QOZ80_1BG0083050 ...
gene-QOZ80_2AG0103930, gene-QOZ80_2AG0132540, gene-QOZ80_2BG0157230, gene-QOZ80_2BG0187930, gene-QOZ80_2BG0188500, gene-QOZ80_2BG0188510, gene-QOZ80_2BG0188520, gene-QOZ80_2BG0188530, gene-QOZ80_2BG0188540, gene-QOZ80_3AG0228750, gene-QOZ80_3BG0275070, gene-QOZ80_3BG0276450, gene-QOZ80_4AG0302570, gene-QOZ80_4AG0318860, gene-QOZ80_4AG0319550, gene-QOZ80_4BG0333490, gene-QOZ80_4BG0350330, gene-QOZ80_4BG0350960, gene-QOZ80_5AG0366250, gene-QOZ80_5AG0386140, gene-QOZ80_5BG0414030, gene-QOZ80_5BG0433260, gene-QOZ80_8AG0614620, gene-QOZ80_8AG0616200, gene-QOZ80_8BG0643700
Poaceae Hordeum vulgare 6 HORVU.MOREX.r3.1HG0077030.1, HORVU.MOREX.r3.3HG0288370.1 ...
HORVU.MOREX.r3.4HG0418530.1, HORVU.MOREX.r3.6HG0568470.1, HORVU.MOREX.r3.6HG0616910.1, HORVU.MOREX.r3.7HG0698330.1
Poaceae Lolium multiflorum 35 gene-QYE76_001593, gene-QYE76_001758, gene-QYE76_002416 ...
gene-QYE76_013939, gene-QYE76_013941, gene-QYE76_015950, gene-QYE76_020386, gene-QYE76_021066, gene-QYE76_022586, gene-QYE76_022651, gene-QYE76_022772, gene-QYE76_039165, gene-QYE76_039181, gene-QYE76_043613, gene-QYE76_043728, gene-QYE76_048021, gene-QYE76_049233, gene-QYE76_050119, gene-QYE76_050636, gene-QYE76_055296, gene-QYE76_058788, gene-QYE76_059450, gene-QYE76_059698, gene-QYE76_059702, gene-QYE76_059703, gene-QYE76_060603, gene-QYE76_060779, gene-QYE76_060781, gene-QYE76_061878, gene-QYE76_062254, gene-QYE76_062381, gene-QYE76_063949, gene-QYE76_063952, gene-QYE76_063953, gene-QYE76_066288
Poaceae Oryza coarctata 18 Oco03G008220, Oco03G011370, Oco03G011800, Oco04G004140 ...
Oco04G008610, Oco04G011770, Oco04G012220, Oco06G016980, Oco07G004440, Oco07G004960, Oco08G004570, Oco08G004940, Oco09G014460, Oco10G014430, Oco21G004210, Oco22G005060, Oco23G003920, Oco24G003450
Poaceae Oryza sativa 12 LOC_Os02g08490.1, LOC_Os02g19450.1, LOC_Os02g32520.1 ...
LOC_Os02g33420.1, LOC_Os03g31300.1, LOC_Os04g32560.1, LOC_Os04g33210.1, LOC_Os05g44340.1, LOC_Os11g16590.1, LOC_Os11g16670.1, LOC_Os11g16770.1, LOC_Os12g12850.1
Poaceae Paspalum vaginatum 10 gene-BS78_01G319500, gene-BS78_01G320800 ...
gene-BS78_04G061500, gene-BS78_04G148700, gene-BS78_06G062100, gene-BS78_06G075000, gene-BS78_06G081600, gene-BS78_07G031800, gene-BS78_09G104000, gene-BS78_09G206100
Poaceae Puccinellia tenuiflora 44 Pt_Chr0103993, Pt_Chr0103995, Pt_Chr0104707, Pt_Chr0105053 ...
Pt_Chr0105867, Pt_Chr0106695, Pt_Chr0106702, Pt_Chr0106705, Pt_Chr0106733, Pt_Chr0107509, Pt_Chr0107929, Pt_Chr0107935, Pt_Chr0108051, Pt_Chr0200050, Pt_Chr0200284, Pt_Chr0200392, Pt_Chr0201657, Pt_Chr0201819, Pt_Chr0202298, Pt_Chr0203584, Pt_Chr0207392, Pt_Chr0302936, Pt_Chr0302960, Pt_Chr0305015, Pt_Chr0400391, Pt_Chr0400392, Pt_Chr0400393, Pt_Chr0400437, Pt_Chr0400445, Pt_Chr0400448, Pt_Chr0402346, Pt_Chr0404174, Pt_Chr0504042, Pt_Chr0504131, Pt_Chr0504382, Pt_Chr0504458, Pt_Chr0504517, Pt_Chr0504519, Pt_Chr0504520, Pt_Chr0602220, Pt_Chr0605896, Pt_Chr0702850, Pt_Chr0703883, Pt_Ctg00238
Poaceae Sporobolus alterniflorus 26 Chr01G016820, Chr01G023750, Chr04G024100, Chr06G026460 ...
Chr06G033880, Chr09G014980, Chr09G014990, Chr09G015440, Chr12G019990, Chr13G010970, Chr13G011360, Chr14G004440, Chr15G025120, Chr18G014130, Chr19G013800, Chr20G013140, Chr22G003370, Chr23G014410, Chr25G002560, Chr25G012070, Chr25G012340, Chr26G005380, Chr29G012190, Chr30G002550, Chr30G011620, Chr30G011960
Poaceae Thinopyrum elongatum 44 Tel1E01G561000, Tel2E01G276100, Tel2E01G276200 ...
Tel2E01G512400, Tel2E01G518200, Tel3E01G159600, Tel3E01G185700, Tel3E01G212500, Tel3E01G448800, Tel3E01G722500, Tel4E01G083500, Tel4E01G091400, Tel4E01G132200, Tel4E01G132300, Tel4E01G141800, Tel4E01G618700, Tel5E01G206300, Tel5E01G511100, Tel5E01G661100, Tel5E01G661200, Tel5E01G661400, Tel5E01G700600, Tel5E01G870800, Tel5E01G871300, Tel5E01G871400, Tel5E01G871500, Tel5E01G871800, Tel5E01G872900, Tel6E01G305200, Tel6E01G375400, Tel6E01G463400, Tel6E01G463600, Tel6E01G599900, Tel7E01G101000, Tel7E01G101400, Tel7E01G103900, Tel7E01G104000, Tel7E01G104500, Tel7E01G105200, Tel7E01G105400, Tel7E01G107600, Tel7E01G773600, Tel7E01G774100, Telscf30101G000200
Poaceae Triticum dicoccoides 56 gene_TRIDC1AG045350, gene_TRIDC1AG050270 ...
gene_TRIDC1BG051300, gene_TRIDC1BG057080, gene_TRIDC2AG016650, gene_TRIDC2AG041580, gene_TRIDC2AG042170, gene_TRIDC2BG020270, gene_TRIDC2BG044580, gene_TRIDC2BG045230, gene_TRIDC3AG010900, gene_TRIDC3AG013150, gene_TRIDC3AG013270, gene_TRIDC3AG015460, gene_TRIDC3AG040760, gene_TRIDC3BG045950, gene_TRIDC4AG035930, gene_TRIDC4AG036770, gene_TRIDC4AG041720, gene_TRIDC4AG049030, gene_TRIDC4AG049040, gene_TRIDC4AG064870, gene_TRIDC4AG064910, gene_TRIDC4AG064940, gene_TRIDC4AG065310, gene_TRIDC4AG065320, gene_TRIDC4BG007140, gene_TRIDC4BG007340, gene_TRIDC4BG012880, gene_TRIDC5AG007190, gene_TRIDC5AG009780, gene_TRIDC5AG020010, gene_TRIDC5AG047570, gene_TRIDC5AG061000, gene_TRIDC5AG077240, gene_TRIDC5BG011430, gene_TRIDC5BG020060, gene_TRIDC5BG051340, gene_TRIDC5BG065030, gene_TRIDC5BG065040, gene_TRIDC5BG065060, gene_TRIDC5BG081950, gene_TRIDC6AG020100, gene_TRIDC6AG029310, gene_TRIDC6AG038050, gene_TRIDC6BG026060, gene_TRIDC6BG036130, gene_TRIDC6BG044980, gene_TRIDC7AG005010, gene_TRIDC7AG005260, gene_TRIDC7AG005270, gene_TRIDC7AG005280, gene_TRIDC7AG063560, gene_TRIDC7BG057080, gene_TRIDC7BG057180, gene_TRIDC7BG057190
Poaceae Triticum aestivum 91 TraesCS1A02G304800.1, TraesCS1A02G340100.1 ...
TraesCS1B02G315600.1, TraesCS1B02G352400.1, TraesCS1D02G342100.1, TraesCS2A02G287300.2, TraesCS2A02G291100.1, TraesCS2B02G158300.1, TraesCS2B02G304200.1, TraesCS2B02G307500.1, TraesCS2D02G136900.1, TraesCS2D02G285800.1, TraesCS2D02G289100.1, TraesCS3A02G090400.1, TraesCS3A02G106800.1, TraesCS3A02G124200.1, TraesCS3A02G274400.1, TraesCS3B02G308100.1, TraesCS3D02G090400.1, TraesCS3D02G273600.1, TraesCS3D02G449000.1, TraesCS4A02G226000.1, TraesCS4A02G232800.1, TraesCS4A02G232900.1.cds1, TraesCS4A02G267200.1, TraesCS4A02G324100.1, TraesCS4A02G436600.1, TraesCS4A02G436900.1, TraesCS4A02G437000.1, TraesCS4A02G443200.1, TraesCS4A02G443300.1, TraesCS4B02G046000.1, TraesCS4B02G082900.1, TraesCS4B02G083000.1, TraesCS4B02G090300.1, TraesCS4B02G380800.1, TraesCS4B02G393100.1.cds1, TraesCS4D02G046000.1, TraesCS4D02G047000.1, TraesCS4D02G081100.1, TraesCS5A02G046800.1, TraesCS5A02G062800.1, TraesCS5A02G118900.1, TraesCS5A02G321300.1, TraesCS5A02G547300.1, TraesCS5B02G070000.1, TraesCS5B02G112500.1, TraesCS5B02G321800.1, TraesCS5B02G422800.1, TraesCS5B02G422900.1, TraesCS5B02G423000.1, TraesCS5B02G537100.1, TraesCS5B02G554000.1, TraesCS5D02G074000.1, TraesCS5D02G118700.1, TraesCS5D02G254700.2, TraesCS5D02G328100.1, TraesCS5D02G429400.1, TraesCS5D02G429500.1, TraesCS5D02G429600.1, TraesCS5D02G429700.1, TraesCS6A02G146400.1, TraesCS6A02G195200.1, TraesCS6B02G174500.1, TraesCS6B02G233800.1, TraesCS6B02G278000.1, TraesCS6D02G135600.1, TraesCS6D02G183600.2, TraesCS7A02G048300.1, TraesCS7A02G048400.1, TraesCS7A02G048500.1, TraesCS7A02G050300.1, TraesCS7A02G050400.1, TraesCS7A02G050700.1, TraesCS7A02G456700.1, TraesCS7B02G357400.1, TraesCS7B02G357500.1, TraesCS7B02G357600.2, TraesCS7D02G042800.1, TraesCS7D02G042900.1, TraesCS7D02G045200.1, TraesCS7D02G045400.1, TraesCS7D02G045500.1, TraesCS7D02G045700.1, TraesCS7D02G445400.1, TraesCS7D02G445500.1, TraesCSU02G064000.1, TraesCSU02G102300.1, TraesCSU02G102400.1, TraesCSU02G131300.1, TraesCSU02G211500.1
Poaceae Zea mays 12 Zm00001eb020330_P002, Zm00001eb021370_P002 ...
Zm00001eb084420_P004, Zm00001eb084890_P001, Zm00001eb157760_P001, Zm00001eb234160_P001, Zm00001eb242420_P001, Zm00001eb293780_P001, Zm00001eb362890_P001, Zm00001eb393250_P001, Zm00001eb411490_P001, Zm00001eb421360_P001
Poaceae Zoysia japonica 13 nbis-gene-12208, nbis-gene-12893, nbis-gene-13887 ...
nbis-gene-18873, nbis-gene-20853, nbis-gene-25109, nbis-gene-33583, nbis-gene-37961, nbis-gene-44164, nbis-gene-44844, nbis-gene-47222, nbis-gene-52024, nbis-gene-7832
Poaceae Zoysia macrostachya 14 Zma_g12312, Zma_g13602, Zma_g15071, Zma_g16426, Zma_g19595 ...
Zma_g19628, Zma_g20513, Zma_g21177, Zma_g24906, Zma_g27240, Zma_g28134, Zma_g28621, Zma_g3477, Zma_g987
Portulacaceae Portulaca oleracea 17 evm.TU.LG01.2744, evm.TU.LG01.2745, evm.TU.LG02.163 ...
evm.TU.LG02.2788, evm.TU.LG02.55, evm.TU.LG05.1227, evm.TU.LG05.875, evm.TU.LG07.598, evm.TU.LG08.884, evm.TU.LG08.885, evm.TU.LG08.962, evm.TU.LG09.1404, evm.TU.LG14.1838, evm.TU.LG15.346, evm.TU.LG22.1040, evm.TU.LG22.1041, evm.TU.LG25.144
Posidoniaceae Posidonia oceanica 6 gene.Posoc02g24130, gene.Posoc03g04310, gene.Posoc05g00130 ...
gene.Posoc07g07810, gene.Posoc09g04060, gene.Posoc09g07110
Rhizophoraceae Bruguiera sexangula 8 evm.TU.Scaffold_10_RagTag.893, evm.TU.Scaffold_11_RagTag.826 ...
evm.TU.Scaffold_11_RagTag.1188, evm.TU.Scaffold_4_RagTag.279, evm.TU.Scaffold_4_RagTag.280, evm.TU.Scaffold_4_RagTag.314, evm.TU.Scaffold_4_RagTag.630, evm.TU.Scaffold_6_RagTag.333
Rhizophoraceae Carallia pectinifolia 5 nbisL1-mrna-12378, nbisL1-mrna-12490, nbisL1-mrna-13580 ...
nbisL1-mrna-14499, nbisL1-mrna-28731
Rhizophoraceae Ceriops tagal 7 nbisL1-mrna-15425, nbisL1-mrna-17104, nbisL1-mrna-18671 ...
nbisL1-mrna-20272, nbisL1-mrna-6890, nbisL1-mrna-6916, nbisL1-mrna-7105
Rhizophoraceae Ceriops zippeliana 6 nbisL1-mrna-12426, nbisL1-mrna-1726, nbisL1-mrna-1992 ...
nbisL1-mrna-2019, nbisL1-mrna-282, nbisL1-mrna-9146
Rhizophoraceae Kandelia candel 7 evm.TU.utg000004l.201, evm.TU.utg000008l.178 ...
evm.TU.utg000008l.198, evm.TU.utg000008l.402, evm.TU.utg000010l.244, evm.TU.utg000011l.189, evm.TU.utg000061l.86
Rhizophoraceae Kandelia obovata 7 Maker00000100, Maker00000568, Maker00000963, Maker00004013 ...
Maker00006984, Maker00008418, Maker00009077
Rhizophoraceae Rhizophora apiculata 7 nbisL1-mrna-11769, nbisL1-mrna-14709, nbisL1-mrna-17006 ...
nbisL1-mrna-2455, nbisL1-mrna-3741, nbisL1-mrna-622, nbisL1-mrna-868
Rhizophoraceae Rhizophora mangle 7 nbisL1-mrna-1319, nbisL1-mrna-17288, nbisL1-mrna-6137 ...
nbisL1-mrna-6138, nbisL1-mrna-7815, nbisL1-mrna-8485, nbisL1-mrna-8832
Salicaceae Populus euphratica 12 populus_peu09133, populus_peu12989, populus_peu14924 ...
populus_peu25150, populus_peu28428, populus_peu28944, populus_peu28995, populus_peu29006, populus_peu30338, populus_peu30339, populus_peu30345, populus_peu30403
Solanaceae Lycium barbarum 7 gene-LOC132601777, gene-LOC132603600, gene-LOC132606056 ...
gene-LOC132621264, gene-LOC132632869, gene-LOC132633124, gene-LOC132633168
Solanaceae Solanum chilense 6 SOLCI000039300, SOLCI001939600, SOLCI004681800 ...
SOLCI006139600, SOLCI006476100, SOLCI006846300
Solanaceae Solanum pennellii 6 gene-LOC107006605, gene-LOC107009671, gene-LOC107012582 ...
gene-LOC107014341, gene-LOC107014406, gene-LOC107023474
Tamaricaceae Reaumuria soongarica 5 STRG.12969_chr02_-, STRG.23877_chr05_+, gene_13502 ...
gene_13614, gene_18223
Tamaricaceae Tamarix chinensis 5 TC01G3207, TC01G4202, TC03G1200, TC06G0057, TC09G1219
Zosteraceae Zostera marina 5 Zosma02g15910.v3.1, Zosma05g07960.v3.1, Zosma06g08470.v3.1 ...
Zosma06g23440.v3.1, Zosma07g00490.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.