Basic Information
Locus ID:
gene-QOZ80_3BG0274980
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 38283422 | 38292717 | - | gene-QOZ80_3BG0274980 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.72 | 51,778.97 Da | 66.90 | 54.31 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 377 | 433 | 3.4E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 206 | 261 | 1.0E-24 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 203 | 264 | 1.01E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 368 | 436 | 2.35E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 190 | 265 | 2.2E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 361 | 437 | 4.0E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 205 | 263 | 6.9E-34 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 376 | 435 | 1.0E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 371 | 436 | 37.171917 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 200 | 264 | 24.44348 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 428 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 328 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_008657198.2 | probable WRKY transcription factor 4 [Zea mays] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | C5WVP7 | WRKY transcription factor 3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G332500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology