Basic Information
Locus ID:
gene-QOZ80_3BG0269440
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
NB-ARC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 14450176 | 14454964 | - | gene-QOZ80_3BG0269440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 145,634.58 Da | 48.60 | 107.52 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 156 | 394 | 1.1E-40 | IPR002182 |
| Pfam | PF18052 | Rx N-terminal domain | 12 | 86 | 6.8E-9 | IPR041118 |
| SUPERFAMILY | SSF52058 | L domain-like | 478 | 794 | 4.42E-46 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 692 | 1088 | 3.57E-27 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1069 | 1281 | 2.04E-25 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 149 | 407 | 1.64E-55 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 393 | 489 | 3.3E-15 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1202 | 1289 | 1.0E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 792 | 1093 | 2.1E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 517 | 791 | 7.5E-52 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1114 | 1201 | 9.8E-9 | IPR032675 |
| Gene3D | G3DSA:1.20.5.4130 | - | 9 | 87 | 2.6E-5 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 140 | 304 | 5.7E-31 | IPR027417 |
| Gene3D | G3DSA:1.10.8.430 | - | 308 | 392 | 1.2E-12 | IPR042197 |
| SMART | SM00369 | LRR_typ_2 | 739 | 763 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 621 | 644 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 799 | 822 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 669 | 694 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1188 | 1212 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 715 | 738 | 110.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 671 | 692 | 8.043085 | IPR001611 |
| PRINTS | PR00364 | Disease resistance protein signature | 173 | 188 | 6.5E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 737 | 753 | 6.5E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 345 | 359 | 6.5E-18 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 247 | 261 | 6.5E-18 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14470.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_021307352.1 | disease resistance protein RGA2 [Sorghum bicolor] | 0 |
| Q7XA40 | Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2 | 0 | |
| TrEMBL | C5WU54 | Disease resistance protein RGA3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G178700 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology