Basic Information
Locus ID:
gene-QOZ80_3BG0269330
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 14269049 | 14273068 | + | gene-QOZ80_3BG0269330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 69,154.09 Da | 47.96 | 93.50 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 19 | 121 | 2.40772E-47 | - |
| Pfam | PF03000 | NPH3 family | 211 | 466 | 1.1E-93 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 113 | 1.0E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 16 | 113 | 8.63E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 15 | 130 | 5.5E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 124 | 2.0E-4 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 211 | 490 | 92.175674 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 96 | 12.867249 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 603 | - | - |
| Coils | Coil | Coil | 531 | 565 | - | - |
| Coils | Coil | Coil | 597 | 622 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_034572905.1 | BTB/POZ domain-containing protein At1g30440 isoform X1 [Setaria viridis] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0A9EW45 | BTB/POZ domain-containing protein At1g30440-like OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology