HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QOZ80_3BG0267940
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3B 11847100 11848314 - gene-QOZ80_3BG0267940
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.06 46,400.31 Da 62.54 63.54 -0.79
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 259 285 - -
MobiDBLite mobidb-lite consensus disorder prediction 319 404 - -
MobiDBLite mobidb-lite consensus disorder prediction 374 404 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021319920.1 uncharacterized protein LOC8086053 [Sorghum bicolor] 0
TrEMBL Q2QRH0 ULP_PROTEASE domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g27590 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 11 AH03.1681, BH02.1694, BH03.321, BH04.871, BH07.2625 ...
BH07.530, BH08.2454, CH01.3764, CH06.1786, CH07.1931, CH07.673
Poaceae Eleusine coracana subsp. coracana 7 gene-QOZ80_3AG0221350, gene-QOZ80_3BG0267940 ...
gene-QOZ80_5BG0436290, gene-QOZ80_7AG0559940, gene-QOZ80_7AG0575730, gene-QOZ80_8AG0621170, gene-QOZ80_9BG0708810
Poaceae Oryza coarctata 4 Oco03G007240, Oco10G013850, Oco11G010490, Oco19G003500
Poaceae Paspalum vaginatum 6 gene-BS78_06G044000, gene-BS78_08G060500, gene-BS78_K024200 ...
gene-BS78_09G090900, gene-BS78_K178800, gene-BS78_K235300
Poaceae Sporobolus alterniflorus 9 Chr01G030640, Chr01G034250, Chr03G009660, Chr05G004500 ...
Chr05G022340, Chr07G021010, Chr23G013710, Chr25G008800, Chr31G003540
Poaceae Zea mays 1 Zm00001eb384270_P001
Poaceae Zoysia japonica 11 nbis-gene-1295, nbis-gene-27399, nbis-gene-33913 ...
nbis-gene-36081, nbis-gene-36092, nbis-gene-42451, nbis-gene-42484, nbis-gene-43865, nbis-gene-48931, nbis-gene-54850, nbis-gene-54938
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.