Basic Information
Locus ID:
gene-QOZ80_3BG0267730
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Zinc knuckle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 11581118 | 11583565 | - | gene-QOZ80_3BG0267730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 53,564.29 Da | 58.27 | 58.81 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16620 | vRING-HC-C4C4_RBBP6 | 72 | 113 | 6.87197E-16 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 65 | 137 | 5.3E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 56 | 152 | 2.4E-13 | IPR013083 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 454 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 436 | - | - |
| Coils | Coil | Coil | 223 | 243 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.4 | - | 0 |
| RefSeq | XP_025791506.1 | E3 ubiquitin ligase PQT3-like [Panicum hallii] | 0 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WBV3 | E3 ubiquitin ligase PQT3-like OS=Eragrostis curvula OX=38414 GN=EJB05_05332 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology