Basic Information
Locus ID:
gene-QOZ80_3BG0256540
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Raffinose synthase or seed imbibition protein Sip1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 2350700 | 2354661 | - | gene-QOZ80_3BG0256540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 84,178.26 Da | 33.05 | 80.42 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05691 | Raffinose synthase or seed imbibition protein Sip1 | 8 | 753 | 0.0 | IPR008811 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 197 | 550 | 3.31E-58 | IPR017853 |
| Gene3D | G3DSA:3.20.20.70 | Aldolase class I | 200 | 545 | 1.5E-12 | IPR013785 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 307 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57520.1 | seed imbibition 2. | 0 |
| RefSeq | XP_039826094.1 | probable galactinol--sucrose galactosyltransferase 2 [Panicum virgatum] | 0 |
| Q94A08 | Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0MBN3 | galactinol--sucrose galactosyltransferase OS=Panicum virgatum OX=38727 GN=PVAP13_9NG063144 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology