Basic Information
Locus ID:
gene-QOZ80_3BG0256290
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3B | 2197199 | 2200427 | + | gene-QOZ80_3BG0256290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.35 | 58,108.25 Da | 55.60 | 53.07 | -1.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 473 | 504 | 1.9E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 375 | 457 | 8.3E-17 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 375 | 457 | 3.1E-25 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 329 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 112 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 373 | - | - |
| Coils | Coil | Coil | 364 | 406 | - | - |
| Coils | Coil | Coil | 409 | 438 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_004981310.1 | uncharacterized protein LOC101753781 [Setaria italica] | 0 |
| TrEMBL | A0A5J9WAS9 | PAPA-1 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03887 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology