HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QOZ80_3BG0256070
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
chr3B 2083375 2086598 + gene-QOZ80_3BG0256070
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.45 47,050.14 Da 49.78 76.79 -0.37
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd13999 STKc_MAP3K-like 109 364 2.40359E-109 -
Pfam PF07714 Protein tyrosine and serine/threonine kinase 105 364 3.9E-61 IPR001245
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 95 381 9.32E-79 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 185 409 7.1E-58 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 92 182 4.8E-21 -
SMART SM00220 serkin_6 103 368 4.5E-68 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 103 368 45.021751 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 223 235 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 109 130 - IPR017441
PRINTS PR00109 Tyrosine kinase catalytic domain signature 179 192 1.2E-10 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 217 235 1.2E-10 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 291 313 1.2E-10 IPR001245
PRINTS PR00109 Tyrosine kinase catalytic domain signature 335 357 1.2E-10 IPR001245
MobiDBLite mobidb-lite consensus disorder prediction 391 407 - -
MobiDBLite mobidb-lite consensus disorder prediction 16 30 - -
MobiDBLite mobidb-lite consensus disorder prediction 373 407 - -
MobiDBLite mobidb-lite consensus disorder prediction 12 66 - -
MobiDBLite mobidb-lite consensus disorder prediction 48 62 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G01850.1 Protein kinase superfamily protein. 0
RefSeq XP_025791417.1 serine/threonine-protein kinase HT1 [Panicum hallii] 0
Swiss-Prot Q9ZQ31 Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 0
TrEMBL A0A5J9W8X3 Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_03872 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 4 jg17762, jg30463, jg3177, jg40400
Aizoaceae Mesembryanthemum crystallinum 4 gene_13625, gene_17487, gene_20406, gene_24221
Amaranthaceae Atriplex hortensis 2 Ah000526, Ah031477
Amaranthaceae Beta vulgaris 2 BVRB_5g118140, BVRB_7g157300
Amaranthaceae Salicornia bigelovii 4 Sbi_jg2204, Sbi_jg34312, Sbi_jg42038, Sbi_jg48094
Amaranthaceae Salicornia europaea 2 Seu_jg2570, Seu_jg27452
Amaranthaceae Suaeda aralocaspica 3 GOSA_00005928, GOSA_00014868, GOSA_00023744
Amaranthaceae Suaeda glauca 3 Sgl55135, Sgl60387, Sgl71061
Amaranthaceae Chenopodium album 6 gene:ENSEOMG00000007287, gene:ENSEOMG00000007643 ...
gene:ENSEOMG00000023056, gene:ENSEOMG00000025852, gene:ENSEOMG00000034190, gene:ENSEOMG00000039231
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.5AG0023640, CQ.Regalona.r1.5BG0025130 ...
CQ.Regalona.r1.7AG0022670, CQ.Regalona.r1.7BG0025190
Anacardiaceae Pistacia vera 2 pistato.v30023180, pistato.v30268840
Apiaceae Apium graveolens 4 Ag4G00493, Ag4G00494, Ag5G02815, Ag9G00445
Arecaceae Cocos nucifera 3 COCNU_02G013770, COCNU_12G006330, scaffold124783G000010
Arecaceae Phoenix dactylifera 4 gene-LOC103695769, gene-LOC103708887, gene-LOC103713421 ...
gene-LOC103723155
Asparagaceae Asparagus officinalis 2 AsparagusV1_02.349.V1.1, AsparagusV1_09.1634.V1.1
Asteraceae Flaveria trinervia 5 Ftri13G08882, Ftri17G02307, Ftri18G26635, Ftri18G31314 ...
Ftri9G20967
Brassicaceae Arabidopsis thaliana 7 AT3G27560.1, AT3G50720.1, AT3G50730.1, AT5G01850.1 ...
AT5G40540.1, AT5G50180.1, AT5G66710.1
Brassicaceae Eutrema salsugineum 5 Thhalv10004342m.g.v1.0, Thhalv10004482m.g.v1.0 ...
Thhalv10011053m.g.v1.0, Thhalv10013975m.g.v1.0, Thhalv10027816m.g.v1.0
Brassicaceae Schrenkiella parvula 6 Sp2g16730.v2.2, Sp2g29990.v2.2, Sp5g11520.v2.2 ...
Sp6g12270.v2.2, Sp6g41090.v2.2, Sp7g01330.v2.2
Brassicaceae Brassica nigra 7 BniB01g026040.2N, BniB02g067750.2N, BniB05g031890.2N ...
BniB06g015350.2N, BniB07g044140.2N, BniB08g033950.2N, BniB08g064580.2N
Casuarinaceae Casuarina equisetifolia 4 Ceq01G1897, Ceq02G1899, Ceq05G0741, Ceq08G0898
Casuarinaceae Casuarina glauca 4 Cgl01G2065, Cgl02G1976, Cgl05G0750, Cgl08G0914
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno03g01840, gene.Cymno08g00900
Dunaliellaceae Dunaliella salina 1 Dusal.1284s00002.v1.0
Hydrocharitaceae Thalassia testudinum 2 gene.Thate07g08860, gene.Thate09g00620
Malvaceae Hibiscus hamabo Siebold & Zucc. 3 nbisL1-mrna-10333, nbisL1-mrna-10835, nbisL1-mrna-4877
Nitrariaceae Nitraria sibirica 5 evm.TU.LG01.885, evm.TU.LG02.2288, evm.TU.LG02.2289 ...
evm.TU.LG05.278, evm.TU.LG10.665
Plantaginaceae Plantago ovata 4 Pov_00002606, Pov_00024181, Pov_00027838, Pov_00028217
Plumbaginaceae Limonium bicolor 3 Lb3G18751, Lb4G25560, Lb5G26737
Poaceae Echinochloa crus-galli 6 AH01.350, AH07.2437, BH01.376, BH07.2250, CH01.227 ...
CH07.2321
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_3AG0210860, gene-QOZ80_3BG0256070 ...
gene-QOZ80_5AG0382570, gene-QOZ80_5BG0429460
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0524710.1, HORVU.MOREX.r3.6HG0590820.1
Poaceae Lolium multiflorum 2 gene-QYE76_023399, gene-QYE76_060891
Poaceae Oryza coarctata 4 Oco03G014230, Oco05G027100, Oco06G028010, Oco06G028130
Poaceae Oryza sativa 2 LOC_Os02g38080.1, LOC_Os03g60150.1
Poaceae Paspalum vaginatum 2 gene-BS78_01G035200, gene-BS78_04G181000
Poaceae Puccinellia tenuiflora 4 Pt_Chr0105720, Pt_Chr0105741, Pt_Chr0204432, Pt_Chr0204489
Poaceae Sporobolus alterniflorus 8 Chr01G001800, Chr04G022750, Chr04G031330, Chr06G024530 ...
Chr07G030340, Chr12G033510, Chr19G012520, Chr27G003420
Poaceae Thinopyrum elongatum 2 Tel5E01G742700, Tel6E01G409700
Poaceae Triticum dicoccoides 4 gene_TRIDC5AG067100, gene_TRIDC5BG072290 ...
gene_TRIDC6AG032280, gene_TRIDC6BG038690
Poaceae Triticum aestivum 6 TraesCS5A02G469200.1, TraesCS5B02G481700.1 ...
TraesCS5D02G482000.1, TraesCS6A02G208500.1, TraesCS6B02G237600.2, TraesCS6D02G192100.1
Poaceae Zea mays 2 Zm00001eb062230_P001, Zm00001eb183610_P001
Poaceae Zoysia japonica 2 nbis-gene-16577, nbis-gene-46313
Poaceae Zoysia macrostachya 3 Zma_g24787, Zma_g2501, Zma_g25527
Portulacaceae Portulaca oleracea 6 evm.TU.LG01.2421, evm.TU.LG05.207, evm.TU.LG07.893 ...
evm.TU.LG14.1587, evm.TU.LG15.800, evm.TU.LG25.1104
Posidoniaceae Posidonia oceanica 2 gene.Posoc02g08740, gene.Posoc05g02660
Rhizophoraceae Bruguiera sexangula 5 evm.TU.Scaffold_1_RagTag.1910, evm.TU.Scaffold_2_RagTag.546 ...
evm.TU.Scaffold_3_RagTag.1940, evm.TU.Scaffold_6_RagTag.112, evm.TU.Scaffold_6_RagTag.1987
Rhizophoraceae Carallia pectinifolia 6 nbisL1-mrna-14933, nbisL1-mrna-17145, nbisL1-mrna-2417 ...
nbisL1-mrna-2558, nbisL1-mrna-4650, nbisL1-mrna-5679
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-2091, nbisL1-mrna-621, nbisL1-mrna-6781 ...
nbisL1-mrna-9501
Rhizophoraceae Ceriops zippeliana 5 nbisL1-mrna-102, nbisL1-mrna-11814, nbisL1-mrna-3102 ...
nbisL1-mrna-3620, nbisL1-mrna-9643
Rhizophoraceae Kandelia candel 5 evm.TU.utg000009l.627, evm.TU.utg000011l.1203 ...
evm.TU.utg000011l.83, evm.TU.utg000016l.756, evm.TU.utg000019l.54
Rhizophoraceae Kandelia obovata 5 Maker00001883, Maker00004943, Maker00007816, Maker00007927 ...
Maker00016986
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-12024, nbisL1-mrna-15574, nbisL1-mrna-2632 ...
nbisL1-mrna-4899
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-13843, nbisL1-mrna-16623, nbisL1-mrna-17479 ...
nbisL1-mrna-3113
Salicaceae Populus euphratica 3 populus_peu01110, populus_peu24405, populus_peu25278
Solanaceae Lycium barbarum 3 gene-LOC132621637, gene-LOC132623851, gene-LOC132631044
Solanaceae Solanum chilense 2 SOLCI003282600, SOLCI004228700
Solanaceae Solanum pennellii 3 gene-LOC107008646, gene-LOC107010441, gene-LOC107031610
Tamaricaceae Reaumuria soongarica 3 STRG.1682_chr01_-, gene_11192, gene_957
Tamaricaceae Tamarix chinensis 2 TC07G1000, TC08G2524
Zosteraceae Zostera marina 2 Zosma05g08450.v3.1, Zosma06g21490.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.