HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: gene-QOZ80_3BG0255800
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3B 1943729 1945087 - gene-QOZ80_3BG0255800
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.52 51,366.51 Da 47.38 90.60 -0.22
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF12937 F-box-like 7 47 1.6E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 5 88 1.44E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039781983.1 uncharacterized protein LOC120649291 [Panicum virgatum] 0
TrEMBL A0A5J9W908 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03845 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 4 AH01.373, AH01.374, BH01.353, BH04.2047
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_3BG0255800, gene-QOZ80_4AG0323620 ...
gene-QOZ80_4BG0352730
Poaceae Lolium multiflorum 2 gene-QYE76_027022, gene-QYE76_060805
Poaceae Paspalum vaginatum 1 gene-BS78_01G032600
Poaceae Sporobolus alterniflorus 2 Chr30G013570, Chr30G013580
Poaceae Thinopyrum elongatum 2 Tel5E01G752700, Tel5E01G752800
Poaceae Triticum dicoccoides 1 gene_TRIDC5BG073010
Poaceae Triticum aestivum 10 TraesCS5A02G473900.1.cds1, TraesCS5A02G474000.1.cds1 ...
TraesCS5A02G474200.1.cds1, TraesCS5B02G487000.1.cds1, TraesCS5B02G487100.1.cds1, TraesCS5B02G487200.1, TraesCS5B02G487500.1.cds1, TraesCS5D02G486700.1.cds1, TraesCS5D02G486800.1.cds1, TraesCS5D02G487200.1
Poaceae Zoysia japonica 1 nbis-gene-8105
Poaceae Zoysia macrostachya 1 Zma_g21049
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.