Basic Information
Locus ID:
gene-QOZ80_3AG0251310
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 52230529 | 52235785 | - | gene-QOZ80_3AG0251310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 75,390.04 Da | 38.65 | 84.03 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 409 | 677 | 2.6E-38 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 115 | 173 | 2.0E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.9E-7 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 388 | 678 | 3.09E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 214 | 1.79E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 370 | 484 | 5.3E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 230 | 1.8E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 691 | 8.4E-55 | - |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 160 | 9.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 180.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 407 | 681 | 33.95483 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 140 | 161 | 7.719656 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 413 | 436 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_039785771.1 | protein STRUBBELIG-RECEPTOR FAMILY 6-like [Panicum virgatum] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0NWA9 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9KG395800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology