Basic Information
Locus ID:
gene-QOZ80_3AG0250330
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 50693640 | 50695547 | - | gene-QOZ80_3AG0250330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 71,957.44 Da | 40.67 | 95.15 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 364 | 620 | 5.7E-39 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 36 | 297 | 3.7E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 20 | 317 | 7.69E-68 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 625 | 4.18E-62 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 343 | 435 | 2.8E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 8 | 105 | 1.6E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 436 | 634 | 8.1E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 106 | 317 | 7.3E-50 | - |
| SMART | SM00220 | serkin_6 | 358 | 622 | 2.6E-16 | IPR000719 |
| SMART | SM00220 | serkin_6 | 33 | 304 | 7.6E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 33 | 300 | 35.707443 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 358 | 626 | 26.350735 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 39 | 61 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 149 | 161 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51550.1 | Malectin/receptor-like protein kinase family protein. Encodes a synergid-expressed, plasma-membrane localized receptor-like kinase that accumulates asymetrically in the synergid membrnane at the filiform apparatus and mediates male-female gametophyte interactions during pollen tube reception. | 0 |
| RefSeq | XP_025792059.1 | probable LRR receptor-like serine/threonine-protein kinase At2g28960 [Panicum hallii] | 0 |
| Q9SCZ4 | Receptor-like protein kinase FERONIA OS=Arabidopsis thaliana OX=3702 GN=FER PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9QI79 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0409 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0250330, gene-QOZ80_3AG0250370 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.5HG0520990.1.CDS1 ... |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_01G329200, gene-BS78_01G329600 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G709800 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC5AG064500, gene_TRIDC5AG064520 ... |
| Poaceae | Triticum aestivum | 8 | TraesCS2B02G538400.1.cds1, TraesCS5A02G449700.1.cds1 ... |