Basic Information
Locus ID:
gene-QOZ80_3AG0247320
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
DWNN domain, a CCHC-type zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 47288995 | 47291763 | - | gene-QOZ80_3AG0247320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 46,572.29 Da | 60.08 | 58.22 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16620 | vRING-HC-C4C4_RBBP6 | 166 | 207 | 2.69352E-12 | - |
| Pfam | PF08783 | DWNN domain | 3 | 77 | 1.2E-17 | IPR014891 |
| SUPERFAMILY | SSF57850 | RING/U-box | 159 | 233 | 2.34E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 149 | 248 | 7.4E-12 | IPR013083 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 80 | 1.3E-16 | - |
| SMART | SM01180 | DWNN_2 | 3 | 78 | 9.1E-22 | IPR014891 |
| ProSiteProfiles | PS51282 | DWNN domain profile. | 3 | 78 | 15.301767 | IPR014891 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 367 | 433 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47430.4 | - | 0 |
| RefSeq | XP_039780828.1 | E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like [Panicum virgatum] | 0 |
| B9DFV2 | E3 ubiquitin ligase PQT3-like OS=Arabidopsis thaliana OX=3702 GN=At5g47430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VSI6 | DWNN domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12534 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology