HalophFGD

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Basic Information
Locus ID: gene-QOZ80_3AG0241990
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3A 42982106 42984856 + gene-QOZ80_3AG0241990
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.49 55,155.63 Da 51.02 82.76 -0.35
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 23 98 9.59E-5 IPR036047
MobiDBLite mobidb-lite consensus disorder prediction 1 22 - -
Coils Coil Coil 474 494 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002463343.1 uncharacterized protein LOC8073148 [Sorghum bicolor] 0
TrEMBL A0A5J9VNL6 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10710 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH03.3980, BH03.4297, BH03.4300, BH03.4301, BH03.4302 ...
BH03.4303, BH03.4304, BH03.70, BH05.541, CH01.2488, CH05.614, CH07.210, CH07.211
Poaceae Eleusine coracana subsp. coracana 8 gene-QOZ80_3AG0241990, gene-QOZ80_5AG0385880 ...
gene-QOZ80_5BG0433150, gene-QOZ80_7AG0580510, gene-QOZ80_7AG0580530, gene-QOZ80_7AG0580540, gene-QOZ80_7BG0611680, gene-QOZ80_7BG0611690
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0017790.1.CDS1 ...
HORVU.MOREX.r3.1HG0042970.1.CDS1, HORVU.MOREX.r3.6HG0541110.1.CDS1
Poaceae Paspalum vaginatum 3 gene-BS78_02G380500, gene-BS78_04G264700 ...
gene-BS78_04G264800
Poaceae Sporobolus alterniflorus 2 Chr24G014800, Chr28G012140
Poaceae Thinopyrum elongatum 2 Tel6E01G041900, Tel6E01G099200
Poaceae Triticum aestivum 6 TraesCS6A02G008900.1.cds1, TraesCS6A02G011200.1.cds1 ...
TraesCS6D02G013900.1.cds1, TraesCS6D02G032700.1, TraesCS6D02G044100.1, TraesCSU02G161200.1.cds1
Poaceae Zoysia japonica 1 nbis-gene-33189
Poaceae Zoysia macrostachya 1 Zma_g5731
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.