Basic Information
Locus ID:
gene-QOZ80_3AG0239300
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 40759717 | 40763293 | - | gene-QOZ80_3AG0239300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 78,356.23 Da | 45.82 | 78.75 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 302 | 336 | 7.17942E-4 | - |
| Pfam | PF00069 | Protein kinase domain | 414 | 676 | 1.7E-40 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 31 | 79 | 4.0E-11 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 389 | 686 | 4.86E-62 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 301 | 338 | 2.77E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 389 | 486 | 1.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 488 | 699 | 9.5E-45 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 251 | 304 | 6.0E-5 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 305 | 344 | 1.1E-6 | - |
| SMART | SM00220 | serkin_6 | 410 | 679 | 6.9E-14 | IPR000719 |
| SMART | SM00179 | egfca_6 | 302 | 343 | 4.5E-4 | IPR001881 |
| SMART | SM00181 | egf_5 | 253 | 301 | 2.4 | IPR000742 |
| SMART | SM00181 | egf_5 | 305 | 343 | 22.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 410 | 679 | 31.424841 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 416 | 438 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 534 | 546 | - | IPR008271 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 302 | 327 | - | IPR018097 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_034576745.1 | wall-associated receptor kinase 4-like [Setaria viridis] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368STT3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_9G486100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology