Basic Information
Locus ID:
gene-QOZ80_3AG0233520
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 36905172 | 36908373 | - | gene-QOZ80_3AG0233520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 110,014.83 Da | 33.42 | 100.22 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 534 | 593 | 1.8E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 74 | 5.6E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 720 | 1001 | 1.8E-42 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 125 | 139 | 0.98 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 716 | 1004 | 5.33E-69 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 81 | 402 | 4.24E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 367 | 619 | 1.5E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 222 | 2.9E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 145 | 1.6E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 385 | 626 | 3.8E-62 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 223 | 384 | 1.3E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 807 | 1.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 808 | 1027 | 2.8E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 83.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 9.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 210.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 718 | 1004 | 1.0E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 220 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 436 | 460 | 58.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 718 | 1011 | 36.880566 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 854 | 866 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 724 | 748 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 511 | 524 | 3.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 3.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_002465865.1 | MDIS1-interacting receptor like kinase 1 [Sorghum bicolor] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | C5WY01 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G506100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology