Basic Information
Locus ID:
gene-QOZ80_3AG0228960
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 29521767 | 29523596 | + | gene-QOZ80_3AG0228960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 63,649.52 Da | 45.08 | 92.53 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 2 | 155 | 1.06457E-46 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 246 | 449 | 7.6E-44 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 2 | 160 | 8.4E-38 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 225 | 527 | 3.24E-72 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 2 | 156 | 8.86E-40 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 215 | 324 | 1.8E-30 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 1 | 168 | 9.4E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 325 | 539 | 3.0E-50 | - |
| SMART | SM00220 | serkin_6 | 245 | 531 | 4.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 245 | 536 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 251 | 276 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 367 | 379 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10530.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_022683444.1 | L-type lectin-domain containing receptor kinase IX.1 [Setaria italica] | 0 |
| Q9LXA5 | L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK91 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368RJ48 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G026900v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3AG0228960 |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.3HG0219310.1, HORVU.MOREX.r3.3HG0231100.1 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G012900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG069590 |
| Poaceae | Triticum aestivum | 7 | TraesCS3A02G438300.1, TraesCS3B02G472200.1 ... |