Basic Information
Locus ID:
gene-QOZ80_3AG0228830
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
WRKY4
Description:
DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 29175061 | 29180659 | + | gene-QOZ80_3AG0228830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 52,032.29 Da | 64.75 | 54.45 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 212 | 267 | 4.5E-24 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 381 | 437 | 3.4E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 209 | 270 | 1.83E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 372 | 440 | 2.48E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 365 | 441 | 4.0E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 195 | 271 | 8.6E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 211 | 269 | 1.4E-33 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 380 | 439 | 1.0E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 206 | 270 | 24.351662 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 375 | 440 | 37.171917 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 494 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 367 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_039829141.1 | probable WRKY transcription factor 4 isoform X1 [Panicum virgatum] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | C5WVP7 | WRKY transcription factor 3 OS=Sorghum bicolor OX=4558 GN=SORBI_3001G332500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology