Basic Information
Locus ID:
gene-QOZ80_3AG0225050
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 15741612 | 15744055 | + | gene-QOZ80_3AG0225050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 28,985.63 Da | 53.80 | 67.17 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 8 | 260 | 3.4E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 146 | 250 | 1.57E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 147 | 262 | 1.2E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 152 | 251 | 24.828148 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 72 | 99 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_004982377.1 | auxin-responsive protein IAA30 isoform X2 [Setaria italica] | 0 |
| P0C132 | Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA30 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SE00 | Auxin-responsive protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_57233 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology