Basic Information
Locus ID:
gene-QOZ80_3AG0222990
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3A | 12768103 | 12771209 | - | gene-QOZ80_3AG0222990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 83,430.05 Da | 48.65 | 65.12 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF10551 | MULE transposase domain | 426 | 519 | 9.0E-24 | IPR018289 |
| Pfam | PF03101 | FAR1 DNA-binding domain | 225 | 303 | 2.4E-10 | IPR004330 |
| Pfam | PF04434 | SWIM zinc finger | 658 | 692 | 5.7E-4 | IPR007527 |
| SMART | SM00575 | 26again6 | 667 | 694 | 6.8E-5 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 656 | 692 | 9.334374 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 0 |
| RefSeq | XP_051229971.1 | protein FAR1-RELATED SEQUENCE 7-like [Lolium perenne] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QGU9 | Protein FAR1-RELATED SEQUENCE OS=Panicum miliaceum OX=4540 GN=C2845_PM12G14680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology