HalophFGD

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Basic Information
Locus ID: gene-QOZ80_3AG0220540
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr3A 9719593 9720884 + gene-QOZ80_3AG0220540
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.37 39,694.03 Da 31.23 99.34 0.21
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08263 Leucine rich repeat N-terminal domain 227 265 0.0018 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 38 59 0.0024 IPR013210
SUPERFAMILY SSF52047 RNI-like 51 332 9.42E-19 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 136 205 3.0E-9 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 228 347 7.7E-22 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 32 117 5.0E-12 IPR032675
MobiDBLite mobidb-lite consensus disorder prediction 108 133 - -
KEGG Pathway
KO Term:
K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G58190.1 receptor like protein 9. 0
RefSeq XP_003559550.1 receptor protein kinase TMK1 [Brachypodium distachyon] 0
TrEMBL A0A0Q3RL84 LRRNT_2 domain-containing protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g11870v3 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 7 jg12881, jg12882, jg17107, jg27636, jg38117, jg5109, jg7387
Aizoaceae Mesembryanthemum crystallinum 4 gene_13214, gene_19180, gene_26641, gene_5423
Amaranthaceae Atriplex hortensis 4 Ah004886, Ah009759, Ah022462, Ah028376
Amaranthaceae Beta vulgaris 4 BVRB_2g032680, BVRB_4g071450, BVRB_7g168170, BVRB_9g214880
Amaranthaceae Salicornia bigelovii 9 Sbi_jg12114, Sbi_jg20922, Sbi_jg22864, Sbi_jg2426 ...
Sbi_jg26619, Sbi_jg33943, Sbi_jg41971, Sbi_jg47051, Sbi_jg48162
Amaranthaceae Salicornia europaea 4 Seu_jg15141, Seu_jg16723, Seu_jg21331, Seu_jg27508
Amaranthaceae Suaeda aralocaspica 4 GOSA_00011851, GOSA_00018173, GOSA_00020352, GOSA_00023493
Amaranthaceae Suaeda glauca 10 Sgl30955, Sgl32363, Sgl36307, Sgl36308, Sgl37663, Sgl61566 ...
Sgl62282, Sgl66831, Sgl73920, Sgl77431
Amaranthaceae Chenopodium album 12 gene:ENSEOMG00000005692, gene:ENSEOMG00000010312 ...
gene:ENSEOMG00000013876, gene:ENSEOMG00000018011, gene:ENSEOMG00000018422, gene:ENSEOMG00000027197, gene:ENSEOMG00000030538, gene:ENSEOMG00000036244, gene:ENSEOMG00000038529, gene:ENSEOMG00000043916, gene:ENSEOMG00000049100, gene:ENSEOMG00000051085
Amaranthaceae Chenopodium quinoa 9 CQ.Regalona.r1.2AG0015160, CQ.Regalona.r1.2BG0017240 ...
CQ.Regalona.r1.4AG0000510, CQ.Regalona.r1.4BG0000610, CQ.Regalona.r1.7AG0009470, CQ.Regalona.r1.7AG0009480, CQ.Regalona.r1.7BG0003680, CQ.Regalona.r1.9AG0020890, CQ.Regalona.r1.9BG0009720
Anacardiaceae Pistacia vera 2 pistato.v30218980, pistato.v30242690
Apiaceae Apium graveolens 7 Ag11G03747, Ag11G03748, Ag1G02106, Ag3G01045, Ag5G02062 ...
Ag8G01892, Ag8G02130
Arecaceae Cocos nucifera 5 COCNU_05G009400, COCNU_08G002230, COCNU_13G001030 ...
scaffold001322G000010, scaffold006704G000010
Arecaceae Phoenix dactylifera 8 gene-LOC103695699, gene-LOC103705819, gene-LOC103706833 ...
gene-LOC103711154, gene-LOC103713358, gene-LOC103723354, gene-LOC108511658, gene-LOC120111654
Asparagaceae Asparagus officinalis 3 AsparagusV1_06.1549.V1.1, AsparagusV1_07.3597.V1.1 ...
AsparagusV1_09.834.V1.1
Asteraceae Flaveria trinervia 7 Ftri11G09296, Ftri11G20844, Ftri12G08064, Ftri13G28138 ...
Ftri17G28080, Ftri18G23865, Ftri6G22193
Brassicaceae Arabidopsis thaliana 5 AT1G24650.1, AT1G34290.1, AT1G66150.1, AT2G01820.1 ...
AT3G23750.1
Brassicaceae Eutrema salsugineum 6 Thhalv10002394m.g.v1.0, Thhalv10003606m.g.v1.0 ...
Thhalv10009550m.g.v1.0, Thhalv10009860m.g.v1.0, Thhalv10018085m.g.v1.0, Thhalv10027392m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp1g23130.v2.2, Sp2g13250.v2.2, Sp3g21460.v2.2 ...
Sp5g21210.v2.2
Brassicaceae Brassica nigra 11 BniB01g037900.2N, BniB02g021680.2N, BniB02g065090.2N ...
BniB02g065130.2N, BniB03g019890.2N, BniB03g025460.2N, BniB03g032250.2N, BniB03g043490.2N, BniB04g009390.2N, BniB07g029080.2N, BniB07g048200.2N
Casuarinaceae Casuarina equisetifolia 10 Ceq07G0585, Ceq07G0674, Ceq07G0687, Ceq07G0688, Ceq07G0690 ...
Ceq07G0691, Ceq07G0692, Ceq07G0693, Ceq08G0608, Ceq09G0789
Casuarinaceae Casuarina glauca 7 Cgl03G2972, Cgl07G0668, Cgl07G0723, Cgl07G0739, Cgl07G0740 ...
Cgl08G0576, Cgl09G0856
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno04g10420, gene.Cymno07g12020
Hydrocharitaceae Thalassia testudinum 4 gene.Thate04g02180, gene.Thate04g22060, gene.Thate05g24760 ...
gene.Thate07g06660
Malvaceae Hibiscus hamabo Siebold & Zucc. 2 nbisL1-mrna-12013, nbisL1-mrna-12014
Nitrariaceae Nitraria sibirica 3 evm.TU.LG02.60, evm.TU.LG03.1177, evm.TU.LG11.34
Plantaginaceae Plantago ovata 4 Pov_00021168, Pov_00025262, Pov_00026883, Pov_00035923
Plumbaginaceae Limonium bicolor 7 Lb1G01657, Lb1G04113, Lb1G04869, Lb2G13110, Lb2G13183 ...
Lb3G20124, Lb5G28726
Poaceae Echinochloa crus-galli 5 AH01.814, BH01.959, BH07.2263, CH01.1000, Contig181.42
Poaceae Eleusine coracana subsp. coracana 3 gene-QOZ80_3AG0218680, gene-QOZ80_3AG0220540 ...
gene-QOZ80_3BG0263980
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.4HG0337740.1
Poaceae Lolium multiflorum 1 gene-QYE76_062364
Poaceae Oryza coarctata 3 Oco05G021880, Oco06G022650, Oco22G007240
Poaceae Oryza sativa 1 LOC_Os03g50810.1
Poaceae Paspalum vaginatum 1 gene-BS78_01G103300
Poaceae Puccinellia tenuiflora 1 Pt_Chr0104993
Poaceae Sporobolus alterniflorus 6 Chr01G006870, Chr03G014640, Chr04G027180, Chr07G026110 ...
Chr12G030600, Chr30G012930
Poaceae Thinopyrum elongatum 1 Tel4E01G086900
Poaceae Triticum dicoccoides 2 gene_TRIDC4AG041390, gene_TRIDC4BG007770
Poaceae Triticum aestivum 3 TraesCS4A02G265100.1, TraesCS4B02G049800.1 ...
TraesCS4D02G050200.1
Poaceae Zea mays 2 Zm00001eb055210_P001, Zm00001eb216120_P001
Poaceae Zoysia japonica 2 nbis-gene-14855, nbis-gene-15945
Poaceae Zoysia macrostachya 2 Zma_g2940, Zma_g625
Portulacaceae Portulaca oleracea 11 evm.TU.LG03.1078, evm.TU.LG07.1, evm.TU.LG07.716 ...
evm.TU.LG08.942, evm.TU.LG12.655, evm.TU.LG13.1541, evm.TU.LG15.220, evm.TU.LG18.97, evm.TU.LG21.1214, evm.TU.LG22.973, evm.TU.LG26.920
Posidoniaceae Posidonia oceanica 4 gene.Posoc01g24810, gene.Posoc02g25920, gene.Posoc05g03730 ...
gene.Posoc08g01400
Rhizophoraceae Bruguiera sexangula 8 evm.TU.Scaffold_10_RagTag.333, evm.TU.Scaffold_15_RagTag.275 ...
evm.TU.Scaffold_17_RagTag.742, evm.TU.Scaffold_3_RagTag.1408, evm.TU.Scaffold_3_RagTag.791, evm.TU.Scaffold_4_RagTag.2001, evm.TU.Scaffold_6_RagTag.1028, evm.TU.Scaffold_6_RagTag.1321
Rhizophoraceae Carallia pectinifolia 7 nbisL1-mrna-1172, nbisL1-mrna-13237, nbisL1-mrna-23435 ...
nbisL1-mrna-25505, nbisL1-mrna-26520, nbisL1-mrna-26563, nbisL1-mrna-26568
Rhizophoraceae Ceriops tagal 9 nbisL1-mrna-12381, nbisL1-mrna-15040, nbisL1-mrna-15041 ...
nbisL1-mrna-16971, nbisL1-mrna-17235, nbisL1-mrna-20472, nbisL1-mrna-20948, nbisL1-mrna-3711, nbisL1-mrna-5691
Rhizophoraceae Ceriops zippeliana 10 nbisL1-mrna-1161, nbisL1-mrna-16739, nbisL1-mrna-17589 ...
nbisL1-mrna-19762, nbisL1-mrna-20072, nbisL1-mrna-2653, nbisL1-mrna-4777, nbisL1-mrna-4778, nbisL1-mrna-6463, nbisL1-mrna-880
Rhizophoraceae Kandelia candel 8 add.evm.TU.utg000019l.312, evm.TU.utg000001l.173 ...
evm.TU.utg000008l.1160, evm.TU.utg000011l.648, evm.TU.utg000011l.860, evm.TU.utg000013l.400, evm.TU.utg000019l.391, evm.TU.utg000033l.219
Rhizophoraceae Kandelia obovata 6 Maker00000689, Maker00004500, Maker00004747, Maker00008197 ...
Maker00012891, Maker00015197
Rhizophoraceae Rhizophora apiculata 8 nbisL1-mrna-10794, nbisL1-mrna-11548, nbisL1-mrna-12267 ...
nbisL1-mrna-13441, nbisL1-mrna-13657, nbisL1-mrna-14230, nbisL1-mrna-16550, nbisL1-mrna-5196
Rhizophoraceae Rhizophora mangle 8 nbisL1-mrna-13222, nbisL1-mrna-14306, nbisL1-mrna-14705 ...
nbisL1-mrna-18094, nbisL1-mrna-21000, nbisL1-mrna-2676, nbisL1-mrna-3549, nbisL1-mrna-3913
Salicaceae Populus euphratica 9 populus_peu05821, populus_peu07241, populus_peu09693 ...
populus_peu11186, populus_peu13537, populus_peu15866, populus_peu21241, populus_peu21242, populus_peu24825
Solanaceae Lycium barbarum 6 gene-LOC132599094, gene-LOC132604413, gene-LOC132604414 ...
gene-LOC132610042, gene-LOC132612347, gene-LOC132616159
Solanaceae Solanum chilense 6 SOLCI001442800, SOLCI002275600, SOLCI004937400 ...
SOLCI005736500, SOLCI006566300, SOLCI007103000
Solanaceae Solanum pennellii 4 gene-LOC107004528, gene-LOC107007498, gene-LOC107029857 ...
gene-LOC107031454
Tamaricaceae Reaumuria soongarica 5 gene_11246, gene_12349, gene_13413, gene_4004, gene_6370
Tamaricaceae Tamarix chinensis 3 TC01G3657, TC06G2614, TC12G2109
Zosteraceae Zostera marina 4 Zosma01g00460.v3.1, Zosma01g30400.v3.1, Zosma05g01890.v3.1 ...
Zosma50g00120.v3.1
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