HalophFGD

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Basic Information
Locus ID: gene-QOZ80_3AG0211990
Species & Taxonomic ID: Eleusine coracana subsp. coracana & 191504
Genome Assembly: GCA_032690845.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr3A 3027467 3029723 - gene-QOZ80_3AG0211990
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.23 65,405.53 Da 52.85 94.01 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52058 L domain-like 240 427 5.61E-7 -
SUPERFAMILY SSF81383 F-box domain 54 92 2.35E-7 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_034575054.1 uncharacterized protein LOC117838953 [Setaria viridis] 0
TrEMBL A0A4U6SSA3 F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_9G058600v2 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 10 AH01.175, BH03.1193, BH03.3926, BH03.3928, BH05.3403 ...
BH05.3404, CH01.424, CH01.425, CH01.662, CH03.1344
Poaceae Eleusine coracana subsp. coracana 2 gene-QOZ80_3AG0211990, gene-QOZ80_3AG0212950
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0517850.1
Poaceae Lolium multiflorum 1 gene-QYE76_061269
Poaceae Oryza coarctata 2 Oco06G002870, Oco06G003350
Poaceae Thinopyrum elongatum 2 Tel5E01G249800, Tel5E01G674400
Poaceae Triticum dicoccoides 6 gene_TRIDC5AG024010, gene_TRIDC5AG055580 ...
gene_TRIDC5AG062200, gene_TRIDC5BG025220, gene_TRIDC5BG066380, gene_TRIDC5BG066390
Poaceae Triticum aestivum 13 TraesCS5A02G142800.1, TraesCS5A02G380200.1 ...
TraesCS5A02G431300.1, TraesCS5A02G431400.1, TraesCS5A02G431500.1, TraesCS5B02G141600.2, TraesCS5B02G383800.1, TraesCS5B02G433100.1, TraesCS5B02G433200.1, TraesCS5D02G149200.1, TraesCS5D02G389900.1, TraesCS5D02G438900.1, TraesCS5D02G439000.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.