Basic Information
Locus ID:
gene-QOZ80_2BG0203470
Species & Taxonomic ID:
Eleusine coracana subsp. coracana & 191504
Genome Assembly:
GCA_032690845.1
Description:
Belongs to the helicase family. RecQ subfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2B | 68951469 | 68953491 | - | gene-QOZ80_2BG0203470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 29,039.75 Da | 38.31 | 106.05 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17920 | DEXHc_RecQ | 25 | 226 | 7.12542E-111 | - |
| Pfam | PF00270 | DEAD/DEAH box helicase | 41 | 206 | 8.0E-21 | IPR011545 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 19 | 219 | 1.09E-41 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 9 | 226 | 1.2E-90 | IPR027417 |
| SMART | SM00487 | ultradead3 | 33 | 235 | 6.0E-31 | IPR014001 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 26 | 252 | 3.4E-87 | IPR004589 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 45 | 219 | 24.146454 | IPR014001 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35740.1 | DEAD/DEAH box RNA helicase family protein . Encodes RECQ3, an ATP-dependent helicase. | 0 |
| RefSeq | XP_025805602.1 | ATP-dependent DNA helicase Q-like 3 isoform X1 [Panicum hallii] | 0 |
| Q9FT72 | ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis thaliana OX=3702 GN=RECQL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Z5RPY1 | ATP-dependent DNA helicase OS=Sorghum bicolor OX=4558 GN=SORBI_3004G319400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology